G514656


Basic Information

Item Value
gene id G514656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47294875 ~ 47295076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583796
cTTTCTGTATGAAAaggctagcctttgctttcctaactacCTGTGTATATTGgctcctaacttccctgaaaagttgcaaaccgcgggggctatttgatgctaatgcggtacgccacaggatgtttgtgctggtcaagggcagtcaggtctggagtgaaccaagggctatatctgttcctggttcaacattttttaaataggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583796 True 202 lncRNA 0.46 1 47294875 47295076

Neighbor

gene id symbol gene type direction distance location
LOC110526052 hic2 coding upstream 77441 47150900 ~ 47217434 (+)
si:dkey-88e18.2 il12b coding upstream 175864 47110812 ~ 47119011 (+)
LOC110526907 NA coding upstream 290523 46993596 ~ 47004352 (+)
LOC110526054 NA coding upstream 316747 46935543 ~ 46978128 (+)
LOC118964876 NA coding upstream 359598 46931084 ~ 46935277 (+)
LOC118964877 NA coding downstream 100291 47395367 ~ 47398426 (+)
LOC110526909 LOC106585521 coding downstream 126165 47421241 ~ 47424219 (+)
LOC110526910 LOC106585521 coding downstream 155769 47450664 ~ 47494972 (+)
LOC118964881 LOC106585521 coding downstream 218556 47425001 ~ 47519480 (+)
LOC118964880 LOC106585521 coding downstream 244245 47539321 ~ 47543002 (+)
G514632 NA non-coding upstream 10449 47281500 ~ 47284426 (+)
G514641 NA non-coding upstream 25544 47269043 ~ 47269331 (+)
G514639 NA non-coding upstream 26954 47267619 ~ 47267921 (+)
G514628 NA non-coding upstream 38715 47255681 ~ 47256160 (+)
G514614 NA non-coding upstream 57098 47237492 ~ 47237777 (+)
G514675 NA non-coding downstream 35351 47330427 ~ 47339327 (+)
G514684 NA non-coding downstream 52385 47347461 ~ 47352548 (+)
G514685 NA non-coding downstream 52561 47347637 ~ 47353169 (+)
G514709 NA non-coding downstream 127227 47422303 ~ 47422634 (+)
G514499 NA other upstream 271783 47022294 ~ 47023092 (+)
G514464 NA other upstream 367161 46926842 ~ 46927714 (+)
G513745 NA other upstream 393752 46900561 ~ 46901123 (+)
G513501 NA other upstream 934290 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 1104583 46076084 ~ 46190292 (+)
G514662 LOC106597055 other downstream 8107 47303183 ~ 47329244 (+)
G514665 NA other downstream 11362 47306438 ~ 47320050 (+)
G515069 NA other downstream 654930 47950006 ~ 47952254 (+)
G515189 LOC100135962 other downstream 1256543 48532377 ~ 48587888 (+)

Expression


Co-expression Network