G514665



Basic Information


Item Value
gene id G514665
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47306438 ~ 47320050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU583807
gacaaatcagaccccaataattacaggggaatttgcgtaaacagtaacttgggaaagattttctgtagcatttttaattcaagaattcaaacctttcttcaagaaaaaaatgtaataagtaaatgtcaaattggctttcttcctaaccatcgcactactgaccatatatacaccttacacacactaattaataaacacgtccaccaaaaaaaagagggcaaaatctttgcttgctttattgactttaaaaaagcatttgattcgatttggcacgaagggctattctacaaaattctacaaagtgggcttggtggtaaggtgtatgacttaataaaatgtatgtacacagaaaataagtgtgcaataaaaatcaaaaaccaaagaacagaatttttttcacaatgtcgaggtgtgagacaaggctgcaatttgagtccaaatcttttcaacatttatatcaatgaattagcagacatgttggaccaatctccagccccaggactcacactatttgacacagaggtgaaatacctgctatatgctgatgacttggtacttctatcaccaaccaaagaaggtcttcaacaaaacattcatattctggagcaatattgccataattgggccctggcagtaaatttcccaaaaactaaaatcatgattttccaaaaaaaacccagatgtcagaaacaaaaatgtaaattcaccctgaacaacaccttaattgaacacacaaaaaattacacctaccttggtctgaccatatctgcatcgggaaactttaatatggcagtgaaggcactcaaagaaaaagcccgcagagcaatgtatgcaataaaaatgaaattattcaaaatcaacatcccaattagaatttggactaaaatatttgacagtgtaatcctaccaatagcactt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU583807 True 918 TUCP 0.35 2 47306438 47320050

Neighbor


gene id symbol gene type direction distance location
LOC110526052 hic2 coding upstream 89004 47150900 ~ 47217434 (+)
si:dkey-88e18.2 il12b coding upstream 187427 47110812 ~ 47119011 (+)
LOC110526907 NA coding upstream 302086 46993596 ~ 47004352 (+)
LOC110526054 NA coding upstream 328310 46935543 ~ 46978128 (+)
LOC118964876 NA coding upstream 371161 46931084 ~ 46935277 (+)
LOC118964877 NA coding downstream 75317 47395367 ~ 47398426 (+)
LOC110526909 LOC106585521 coding downstream 101191 47421241 ~ 47424219 (+)
LOC110526910 LOC106585521 coding downstream 130795 47450664 ~ 47494972 (+)
LOC118964881 LOC106585521 coding downstream 193582 47425001 ~ 47519480 (+)
LOC118964880 LOC106585521 coding downstream 219271 47539321 ~ 47543002 (+)
G514656 NA non-coding upstream 11362 47294875 ~ 47295076 (+)
G514632 NA non-coding upstream 22012 47281500 ~ 47284426 (+)
G514641 NA non-coding upstream 37107 47269043 ~ 47269331 (+)
G514639 NA non-coding upstream 38517 47267619 ~ 47267921 (+)
G514628 NA non-coding upstream 50278 47255681 ~ 47256160 (+)
G514675 NA non-coding downstream 10377 47330427 ~ 47339327 (+)
G514684 NA non-coding downstream 27411 47347461 ~ 47352548 (+)
G514685 NA non-coding downstream 27587 47347637 ~ 47353169 (+)
G514709 NA non-coding downstream 102253 47422303 ~ 47422634 (+)
G514499 NA other upstream 283346 47022294 ~ 47023092 (+)
G514464 NA other upstream 378724 46926842 ~ 46927714 (+)
G513745 NA other upstream 405315 46900561 ~ 46901123 (+)
G513501 NA other upstream 945853 46359956 ~ 46360585 (+)
LOC110526042 LOC106584891 other upstream 1116146 46076084 ~ 46190292 (+)
G515069 NA other downstream 629956 47950006 ~ 47952254 (+)
G515189 LOC100135962 other downstream 1231569 48532377 ~ 48587888 (+)
LOC110526072 LOC106587002 other downstream 1628567 48948617 ~ 49037542 (+)
edf1 edf1 other downstream 1863823 49183291 ~ 49187334 (+)

Expression



Co-expression Network