G514718


Basic Information

Item Value
gene id G514718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47437338 ~ 47437660 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU583881
gcaaggcactgtactacccatcattgcgacctgtacgctctcattggctggccctcgcttcatactcgtcgccaaacccactggctccatgtcatctacaagaccctgctaggtaaagtccccccttatctcagctcgctggtcaccatagcataacccacctgtagcacgcgctccagcaggtatatctctctggtcaaccccaaaaatctctgaaactggaaacacttatctccctcactagctttaagcacca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU583881 True 256 lncRNA 0.52 2 47437338 47437660

Neighbor

gene id symbol gene type direction distance location
LOC110526909 LOC106585521 coding upstream 13119 47421241 ~ 47424219 (+)
LOC118964877 NA coding upstream 38912 47395367 ~ 47398426 (+)
LOC110526052 hic2 coding upstream 219904 47150900 ~ 47217434 (+)
si:dkey-88e18.2 il12b coding upstream 318327 47110812 ~ 47119011 (+)
LOC110526907 NA coding upstream 432986 46993596 ~ 47004352 (+)
LOC110526910 LOC106585521 coding downstream 13185 47450664 ~ 47494972 (+)
LOC118964881 LOC106585521 coding downstream 75972 47425001 ~ 47519480 (+)
LOC118964880 LOC106585521 coding downstream 101661 47539321 ~ 47543002 (+)
LOC118964879 LOC106585521 coding downstream 233671 47671331 ~ 47675493 (+)
LOC118964888 LOC106585521 coding downstream 287971 47725631 ~ 48235995 (+)
G514709 NA non-coding upstream 14704 47422303 ~ 47422634 (+)
G514685 NA non-coding upstream 84169 47347637 ~ 47353169 (+)
G514684 NA non-coding upstream 84790 47347461 ~ 47352548 (+)
G514675 NA non-coding upstream 98011 47330427 ~ 47339327 (+)
G514656 NA non-coding upstream 142262 47294875 ~ 47295076 (+)
G514732 LOC106585521 non-coding downstream 53828 47491488 ~ 47492043 (+)
G515037 NA non-coding downstream 105687 47543347 ~ 47543994 (+)
G515051 NA non-coding downstream 267851 47705511 ~ 47705885 (+)
G514662 LOC106597055 other upstream 108094 47303183 ~ 47329244 (+)
G514665 NA other upstream 117288 47306438 ~ 47320050 (+)
G514499 NA other upstream 414246 47022294 ~ 47023092 (+)
G514464 NA other upstream 509624 46926842 ~ 46927714 (+)
G513745 NA other upstream 536215 46900561 ~ 46901123 (+)
G515069 NA other downstream 512346 47950006 ~ 47952254 (+)
G515189 LOC100135962 other downstream 1113959 48532377 ~ 48587888 (+)
LOC110526072 LOC106587002 other downstream 1510957 48948617 ~ 49037542 (+)
edf1 edf1 other downstream 1746213 49183291 ~ 49187334 (+)

Expression


Co-expression Network