Gene
RNA
| Item | Value |
|---|---|
| gene id | G515037 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 47543347 ~ 47543994 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110512141 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU584235 | True | 648 | lncRNA | 0.41 | 1 | 47543347 | 47543994 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964880 | LOC106585521 | coding | upstream | 345 | 47539321 ~ 47543002 (+) |
| LOC118964881 | LOC106585521 | coding | upstream | 23873 | 47425001 ~ 47519480 (+) |
| LOC110526910 | LOC106585521 | coding | upstream | 48375 | 47450664 ~ 47494972 (+) |
| LOC110526909 | LOC106585521 | coding | upstream | 119128 | 47421241 ~ 47424219 (+) |
| LOC118964877 | NA | coding | upstream | 144921 | 47395367 ~ 47398426 (+) |
| LOC118964879 | LOC106585521 | coding | downstream | 127337 | 47671331 ~ 47675493 (+) |
| LOC118964888 | LOC106585521 | coding | downstream | 181637 | 47725631 ~ 48235995 (+) |
| LOC118964889 | LOC106585521 | coding | downstream | 409724 | 47953718 ~ 47955681 (+) |
| LOC110512140 | LOC106585521 | coding | downstream | 453912 | 47997906 ~ 48003429 (+) |
| LOC118964887 | LOC106585521 | coding | downstream | 493093 | 48037087 ~ 48039797 (+) |
| G514732 | LOC106585521 | non-coding | upstream | 51304 | 47491488 ~ 47492043 (+) |
| G514718 | NA | non-coding | upstream | 105687 | 47437338 ~ 47437660 (+) |
| G514709 | NA | non-coding | upstream | 120713 | 47422303 ~ 47422634 (+) |
| G515051 | NA | non-coding | downstream | 161517 | 47705511 ~ 47705885 (+) |
| G515056 | NA | non-coding | downstream | 165161 | 47709155 ~ 47709359 (+) |
| G515057 | NA | non-coding | downstream | 172044 | 47716038 ~ 47716868 (+) |
| G515061 | NA | non-coding | downstream | 178440 | 47722434 ~ 47722844 (+) |
| G514662 | LOC106597055 | other | upstream | 214103 | 47303183 ~ 47329244 (+) |
| G514665 | NA | other | upstream | 223297 | 47306438 ~ 47320050 (+) |
| G514499 | NA | other | upstream | 520255 | 47022294 ~ 47023092 (+) |
| G514464 | NA | other | upstream | 615633 | 46926842 ~ 46927714 (+) |
| G515069 | NA | other | downstream | 406012 | 47950006 ~ 47952254 (+) |
| G515189 | LOC100135962 | other | downstream | 1007625 | 48532377 ~ 48587888 (+) |
| LOC110526072 | LOC106587002 | other | downstream | 1404623 | 48948617 ~ 49037542 (+) |
| edf1 | edf1 | other | downstream | 1639879 | 49183291 ~ 49187334 (+) |
| LOC110526066 | LOC106584148 | other | downstream | 1689585 | 49233579 ~ 49260632 (+) |
