G515057


Basic Information

Item Value
gene id G515057
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47716038 ~ 47716868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU584256
caaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtaccggcccattaaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacaaaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacccaaaaaaatacatctaaaaaattttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacataaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaaggaaacaaaaaaaaatacatctaaaattttttgagcatgacaaattcgtgatggtacctgcccattgaaacatattgcaaatgcacagtgactttgaaaaagtaaggaaacaaacaaattcgataaacaaattcgtgatggtacctgcccattaaaacatattccaaatgcacagtgactttgaaaaagtaagaaacaaaaaaaaatacatctaaaattttttgagcatgacaaattcgtgatggtacctgccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU584256 True 831 lncRNA 0.32 1 47716038 47716868

Neighbor

gene id symbol gene type direction distance location
LOC118964879 LOC106585521 coding upstream 40545 47671331 ~ 47675493 (+)
LOC118964880 LOC106585521 coding upstream 173036 47539321 ~ 47543002 (+)
LOC118964881 LOC106585521 coding upstream 196564 47425001 ~ 47519480 (+)
LOC110526910 LOC106585521 coding upstream 221066 47450664 ~ 47494972 (+)
LOC110526909 LOC106585521 coding upstream 291819 47421241 ~ 47424219 (+)
LOC118964888 LOC106585521 coding downstream 8763 47725631 ~ 48235995 (+)
LOC118964889 LOC106585521 coding downstream 236850 47953718 ~ 47955681 (+)
LOC110512140 LOC106585521 coding downstream 281038 47997906 ~ 48003429 (+)
LOC118964887 LOC106585521 coding downstream 320219 48037087 ~ 48039797 (+)
LOC118964885 LOC106585521 coding downstream 528108 48244976 ~ 48249949 (+)
G515056 NA non-coding upstream 6679 47709155 ~ 47709359 (+)
G515051 NA non-coding upstream 10153 47705511 ~ 47705885 (+)
G515037 NA non-coding upstream 172044 47543347 ~ 47543994 (+)
G515061 NA non-coding downstream 5566 47722434 ~ 47722844 (+)
G515127 LOC106585477 non-coding downstream 573343 48290211 ~ 48290564 (+)
G515132 NA non-coding downstream 598392 48315260 ~ 48315527 (+)
G515135 LOC106585477 non-coding downstream 600862 48317730 ~ 48318344 (+)
G515137 LOC106585477 non-coding downstream 602019 48318887 ~ 48319224 (+)
G514662 LOC106597055 other upstream 386794 47303183 ~ 47329244 (+)
G514665 NA other upstream 395988 47306438 ~ 47320050 (+)
G514499 NA other upstream 692946 47022294 ~ 47023092 (+)
G514464 NA other upstream 788324 46926842 ~ 46927714 (+)
G515069 NA other downstream 233138 47950006 ~ 47952254 (+)
G515189 LOC100135962 other downstream 834751 48532377 ~ 48587888 (+)
LOC110526072 LOC106587002 other downstream 1231749 48948617 ~ 49037542 (+)
edf1 edf1 other downstream 1467005 49183291 ~ 49187334 (+)
LOC110526066 LOC106584148 other downstream 1516711 49233579 ~ 49260632 (+)

Expression


Co-expression Network