G515122 (LOC106585477)


Basic Information

Item Value
gene id G515122
gene name LOC106585477
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 48263993 ~ 48264977 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU584332
gtttattttccctgacatggctatctagtgactccactaactcaacaccagtgtgcaggtaaaatatgtttccttccttttcttttctctagccaatggagagtgattcagcagggcatgaaaaataatCTCACATTCGAGCAGCTCTCCATGCTGTGTCTGAAGATTGTTAAAGTCGTGACCCAGACAGCCCTCCGAATTCTCCTACCAGCGCTAGCTCGTATCATGGGGGTGAACCTGAGGAGTGGGGCAACCTCCCCAGAATCCCAGTGCTCTCTGACAGGGTCTGAGGATTCCTTAGGCggtctggatgagagagagaaaaggctgctgatcagtgagatgaactactggactaaggagaggaggaggaatggcagtgcaggatgccgccaaaaatccactcgcagaacctcatcaccatgctgttcgcctaagagGTCCCAGACCTCATTGCAGAGCTTGCC

Function

NR:

description
uncharacterized protein LOC109873445

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU584332 True 467 TUCP 0.50 3 48263993 48264977

Neighbor

gene id symbol gene type direction distance location
LOC118965031 LOC106585477 coding downstream 246139 48016304 ~ 48017854 (-)
LOC110511762 NA coding downstream 278342 47943033 ~ 47985651 (-)
LOC110513487 LOC106585477 coding downstream 288345 47948315 ~ 47975648 (-)
LOC118964890 NA coding downstream 329676 47933538 ~ 47934317 (-)
LOC118964882 NA coding downstream 574741 47688651 ~ 47689252 (-)
LOC110512142 LOC106585477 coding upstream 32540 48292846 ~ 48318495 (-)
LOC118965032 LOC106585477 coding upstream 81887 48346864 ~ 48348019 (-)
LOC118964894 NA coding upstream 83732 48348709 ~ 48353264 (-)
LOC118964892 LOC106585477 coding upstream 113408 48375946 ~ 48387076 (-)
rab14 LOC106587009 coding upstream 270708 48535685 ~ 48540886 (-)
G515104 NA non-coding downstream 266927 47996809 ~ 47997066 (-)
G515103 NA non-coding downstream 269186 47994489 ~ 47994807 (-)
G515099 NA non-coding downstream 276637 47987134 ~ 47987356 (-)
G515067 NA non-coding downstream 320993 47942749 ~ 47943000 (-)
G515123 NA non-coding upstream 193 48265170 ~ 48266108 (-)
G515128 LOC106585477 non-coding upstream 25192 48290169 ~ 48290686 (-)
G515141 NA non-coding upstream 56076 48321053 ~ 48321460 (-)
G515144 NA non-coding upstream 59575 48324552 ~ 48324889 (-)
G515145 NA non-coding upstream 60484 48325461 ~ 48326114 (-)
G515094 LOC106585477 other downstream 287018 47974793 ~ 47976975 (-)
G514777 NA other downstream 1247497 47016162 ~ 47016496 (-)
G514434 NA other downstream 1353043 46910658 ~ 46910950 (-)
LOC110526044 LOC107699739 other downstream 1833633 46367701 ~ 46430607 (-)
apba1a apba1 other downstream 1903107 46263121 ~ 46360886 (-)
G515139 LOC106585477 other upstream 54770 48319747 ~ 48320588 (-)
prdm12b LOC106587007 other upstream 362061 48625747 ~ 48630388 (-)
LOC110512258 LOC106585521 other upstream 1052067 49316279 ~ 49320412 (-)

Expression


Co-expression Network