Gene
RNA
| Item | Value |
|---|---|
| gene id | G515507 |
| gene name | cntrl |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 48413302 ~ 48420975 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cntrl | Predicted to enable cytoskeletal protein binding activity. Predicted to act upstream of or within regulation of cytoskeleton organization. Predicted to be located in microtubule organizing center. Is expressed in brain. Orthologous to human CNTRL (centriolin). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU584764 | True | 340 | lncRNA | 0.49 | 2 | 48413302 | 48420975 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964892 | LOC106585477 | coding | downstream | 26226 | 48375946 ~ 48387076 (-) |
| LOC118964894 | NA | coding | downstream | 60038 | 48348709 ~ 48353264 (-) |
| LOC118965032 | LOC106585477 | coding | downstream | 65283 | 48346864 ~ 48348019 (-) |
| LOC110512142 | LOC106585477 | coding | downstream | 94807 | 48292846 ~ 48318495 (-) |
| LOC118965031 | LOC106585477 | coding | downstream | 395448 | 48016304 ~ 48017854 (-) |
| rab14 | LOC106587009 | coding | upstream | 114710 | 48535685 ~ 48540886 (-) |
| c5 | c5 | coding | upstream | 130645 | 48551620 ~ 48625435 (-) |
| prdm12b | LOC106587007 | coding | upstream | 204772 | 48625747 ~ 48630388 (-) |
| LOC110526076 | LOC106587004 | coding | upstream | 251500 | 48672475 ~ 48750372 (-) |
| surf4l | LOC106587003 | coding | upstream | 478369 | 48899344 ~ 48944876 (-) |
| G515145 | NA | non-coding | downstream | 87188 | 48325461 ~ 48326114 (-) |
| G515144 | NA | non-coding | downstream | 88413 | 48324552 ~ 48324889 (-) |
| G515141 | NA | non-coding | downstream | 91842 | 48321053 ~ 48321460 (-) |
| G515128 | LOC106585477 | non-coding | downstream | 122616 | 48290169 ~ 48290686 (-) |
| G515121 | NA | non-coding | downstream | 126924 | 48258331 ~ 48286378 (-) |
| G515583 | cntrl | non-coding | upstream | 67699 | 48488674 ~ 48490587 (-) |
| G515633 | NA | non-coding | upstream | 189467 | 48610442 ~ 48616313 (-) |
| G515703 | NA | non-coding | upstream | 331404 | 48752379 ~ 48766984 (-) |
| G515772 | NA | non-coding | upstream | 451016 | 48871991 ~ 48872300 (-) |
| G515782 | NA | non-coding | upstream | 469959 | 48890934 ~ 48891735 (-) |
| G515139 | LOC106585477 | other | downstream | 92714 | 48319747 ~ 48320588 (-) |
| G515122 | LOC106585477 | other | downstream | 148325 | 48263993 ~ 48264977 (-) |
| G515094 | LOC106585477 | other | downstream | 436327 | 47974793 ~ 47976975 (-) |
| LOC110512258 | LOC106585521 | other | upstream | 896069 | 49316279 ~ 49320412 (-) |
| LOC110512256 | LOC106585521 | other | upstream | 926495 | 49346858 ~ 49349193 (-) |
| LOC118936342 | LOC106585521 | other | upstream | 958847 | 49379716 ~ 49385907 (-) |
| G516320 | LOC106585521 | other | upstream | 1114240 | 49535215 ~ 49536285 (-) |
