Gene
RNA
| Item | Value |
|---|---|
| gene id | G515782 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 48890934 ~ 48891735 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU585055 | True | 417 | lncRNA | 0.55 | 2 | 48890934 | 48891735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526076 | LOC106587004 | coding | downstream | 140562 | 48672475 ~ 48750372 (-) |
| prdm12b | LOC106587007 | coding | downstream | 260546 | 48625747 ~ 48630388 (-) |
| c5 | c5 | coding | downstream | 265499 | 48551620 ~ 48625435 (-) |
| rab14 | LOC106587009 | coding | downstream | 350048 | 48535685 ~ 48540886 (-) |
| LOC118964892 | LOC106585477 | coding | downstream | 503858 | 48375946 ~ 48387076 (-) |
| surf4l | LOC106587003 | coding | upstream | 7609 | 48899344 ~ 48944876 (-) |
| LOC110526068 | LOC106586971 | coding | upstream | 303453 | 49195188 ~ 49220181 (-) |
| serpind1 | LOC106603687 | coding | upstream | 341849 | 49233584 ~ 49240694 (-) |
| LOC118964899 | LOC106585521 | coding | upstream | 422490 | 49314225 ~ 49316393 (-) |
| LOC110512258 | LOC106585521 | coding | upstream | 424544 | 49316279 ~ 49320412 (-) |
| G515772 | NA | non-coding | downstream | 18634 | 48871991 ~ 48872300 (-) |
| G515703 | NA | non-coding | downstream | 123950 | 48752379 ~ 48766984 (-) |
| G515633 | NA | non-coding | downstream | 274621 | 48610442 ~ 48616313 (-) |
| G515583 | cntrl | non-coding | downstream | 400347 | 48488674 ~ 48490587 (-) |
| G515507 | cntrl | non-coding | downstream | 469959 | 48413302 ~ 48420975 (-) |
| G515783 | NA | non-coding | upstream | 994 | 48892729 ~ 48892931 (-) |
| G515785 | NA | non-coding | upstream | 2724 | 48894459 ~ 48895568 (-) |
| G515786 | NA | non-coding | upstream | 3857 | 48895592 ~ 48896691 (-) |
| G515819 | NA | non-coding | upstream | 45922 | 48937657 ~ 48937872 (-) |
| G515823 | NA | non-coding | upstream | 46842 | 48938577 ~ 48938894 (-) |
| G515139 | LOC106585477 | other | downstream | 570346 | 48319747 ~ 48320588 (-) |
| LOC110512142 | LOC106585477 | other | downstream | 572527 | 48292846 ~ 48318495 (-) |
| G515122 | LOC106585477 | other | downstream | 625957 | 48263993 ~ 48264977 (-) |
| LOC110512256 | LOC106585521 | other | upstream | 455735 | 49346858 ~ 49349193 (-) |
| LOC118936342 | LOC106585521 | other | upstream | 488087 | 49379716 ~ 49385907 (-) |
| G516320 | LOC106585521 | other | upstream | 643480 | 49535215 ~ 49536285 (-) |
| LOC110515945 | LOC106585521 | other | upstream | 731314 | 49622196 ~ 49624916 (-) |
