G515785


Basic Information

Item Value
gene id G515785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 48894459 ~ 48895568 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU585059
tgacattttattgcatgacattgatcacctaccaaccagtaagaattctgttttttctttaagaagccctcctgttctccactcattacctgtattaactgcacctgtttgaactcgttacctgtataaaagacacctgtccacacactcaatcaaacagactccaacctctccacagtgGCCGAGACCAGACTTTTAGGCAAGTGGAAGATGTTTGAAATTATTTTCCTTCTGAGTTTCCTGCTAATACAGGATGTAGGTGGTGTTTCCTATTTCTAACACAGCAGGATGAGGGCATCAATACATTTCTAGCCTTCTCTCTACACTATGTCACAGTAGTCAATCAAATTAGTTGTTGGGTTTGTACATATGCACCCATTCACATCAAGGGCAGGTATTCCATTAAGGGTTATTCCTTTTAACCAGAGTGAAATGTTGGGTGTATGGAGAGATTATTGGCGATTATTGGTACTAATTTGGGTAAGAATGTTGAGTATCAACATGCTAGAGTACCTAGTTCTGCAGTACCTTCCTTCATTTGAGATTACCAATGACACTAATCAGCGACCACCTTACCTAGTTATTACACAAGCCCCTGTTGGGTGGTTAGGTTTTAATAGGTCACTCTTTTGGAATTTGTCTCAACTGCACCAGGACGCGTTTGTCAAAGTAGGACAGAGAAAGTGTGATCAGACAACAGATCTATCTATCTGCCTCTGATGGTACTAAGGTTGCGGAATGTCTAATGTCTGTTTAATTGACTTTTGGTAATGGCACTATGACTACTTTCTATGCCAATACCTTCGGTAATATCATCAATGATGGTATGGTAGCTCCTAATGGGACTTACTTTATTGTGGATACTATGCCTGTTCCTGGTTACCAAAGTTGTGGCAAGGGTCGTGCTATTTGGGATATGTCGTATATCATGTAAAACATTCAGTGAATTATAAACGTGTGATTACAGAAACGGAGAGATTCTTTGCAATTGCTTTTTCCATTTTATGGTATTTCTAAAATAGCACAGGAAGTTATTAATATGGTTAACTCTGGAAATCCTAGCTAATAGTACAATTGAGAGTCTTGAGTTAGTTACAGCTGAGATGATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU585059 True 1110 lncRNA 0.39 1 48894459 48895568

Neighbor

gene id symbol gene type direction distance location
LOC110526076 LOC106587004 coding downstream 144087 48672475 ~ 48750372 (-)
prdm12b LOC106587007 coding downstream 264071 48625747 ~ 48630388 (-)
c5 c5 coding downstream 269024 48551620 ~ 48625435 (-)
rab14 LOC106587009 coding downstream 353573 48535685 ~ 48540886 (-)
LOC118964892 LOC106585477 coding downstream 507383 48375946 ~ 48387076 (-)
surf4l LOC106587003 coding upstream 3776 48899344 ~ 48944876 (-)
LOC110526068 LOC106586971 coding upstream 299620 49195188 ~ 49220181 (-)
serpind1 LOC106603687 coding upstream 338016 49233584 ~ 49240694 (-)
LOC118964899 LOC106585521 coding upstream 418657 49314225 ~ 49316393 (-)
LOC110512258 LOC106585521 coding upstream 420711 49316279 ~ 49320412 (-)
G515783 NA non-coding downstream 1528 48892729 ~ 48892931 (-)
G515782 NA non-coding downstream 2724 48890934 ~ 48891735 (-)
G515772 NA non-coding downstream 22159 48871991 ~ 48872300 (-)
G515703 NA non-coding downstream 127475 48752379 ~ 48766984 (-)
G515633 NA non-coding downstream 278146 48610442 ~ 48616313 (-)
G515786 NA non-coding upstream 24 48895592 ~ 48896691 (-)
G515819 NA non-coding upstream 42089 48937657 ~ 48937872 (-)
G515823 NA non-coding upstream 43009 48938577 ~ 48938894 (-)
G515822 NA non-coding upstream 46058 48941626 ~ 48941835 (-)
G515139 LOC106585477 other downstream 573871 48319747 ~ 48320588 (-)
LOC110512142 LOC106585477 other downstream 576052 48292846 ~ 48318495 (-)
G515122 LOC106585477 other downstream 629482 48263993 ~ 48264977 (-)
LOC110512256 LOC106585521 other upstream 451902 49346858 ~ 49349193 (-)
LOC118936342 LOC106585521 other upstream 484254 49379716 ~ 49385907 (-)
G516320 LOC106585521 other upstream 639647 49535215 ~ 49536285 (-)
LOC110515945 LOC106585521 other upstream 727481 49622196 ~ 49624916 (-)

Expression


Co-expression Network