Gene
RNA
| Item | Value |
|---|---|
| gene id | G515446 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 48894917 ~ 48895566 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU584696 | True | 650 | lncRNA | 0.40 | 1 | 48894917 | 48895566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cntrl | cntrl | coding | upstream | 366159 | 48419773 ~ 48528758 (+) |
| LOC110526080 | LOC106585521 | coding | upstream | 501910 | 48354613 ~ 48393007 (+) |
| LOC118964893 | LOC106585521 | coding | upstream | 534568 | 48358853 ~ 48360349 (+) |
| LOC110514397 | LOC106585521 | coding | upstream | 536583 | 48357549 ~ 48358334 (+) |
| LOC118936658 | LOC106585521 | coding | upstream | 563471 | 48327868 ~ 48331446 (+) |
| LOC110526072 | LOC106587002 | coding | downstream | 53426 | 48948617 ~ 49037542 (+) |
| cmlc1 | myl4 | coding | downstream | 166884 | 49062450 ~ 49063259 (+) |
| qsox2 | qsox2 | coding | downstream | 181091 | 49076657 ~ 49134305 (+) |
| LOC110526069 | LOC106586970 | coding | downstream | 250561 | 49146127 ~ 49156002 (+) |
| edf1 | edf1 | coding | downstream | 287725 | 49183291 ~ 49187334 (+) |
| G515346 | NA | non-coding | upstream | 170173 | 48724494 ~ 48724744 (+) |
| G515308 | NA | non-coding | upstream | 219359 | 48674884 ~ 48675558 (+) |
| G515190 | c5 | non-coding | upstream | 275288 | 48595518 ~ 48619629 (+) |
| G515262 | NA | non-coding | upstream | 292536 | 48599783 ~ 48602381 (+) |
| G515189 | LOC100135962 | non-coding | upstream | 307029 | 48532377 ~ 48587888 (+) |
| G515447 | NA | non-coding | downstream | 111 | 48895677 ~ 48896770 (+) |
| G515460 | NA | non-coding | downstream | 3530 | 48899096 ~ 48899301 (+) |
| G515442 | LOC106587003 | non-coding | downstream | 3835 | 48899401 ~ 48900834 (+) |
| G515821 | NA | non-coding | downstream | 45020 | 48940586 ~ 48941783 (+) |
| G515836 | NA | non-coding | downstream | 59543 | 48955109 ~ 48955421 (+) |
| G515069 | NA | other | upstream | 942663 | 47950006 ~ 47952254 (+) |
| LOC118964881 | LOC106585521 | other | upstream | 1378207 | 47425001 ~ 47519480 (+) |
| G514662 | LOC106597055 | other | upstream | 1565673 | 47303183 ~ 47329244 (+) |
| LOC110526066 | LOC106584148 | other | downstream | 338013 | 49233579 ~ 49260632 (+) |
| G516011 | NA | other | downstream | 409559 | 49305125 ~ 49307140 (+) |
| LOC118964898 | LOC106585477 | other | downstream | 490948 | 49347319 ~ 49387212 (+) |
