G515786


Basic Information

Item Value
gene id G515786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 48895592 ~ 48896691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU585060
CTGCTTCTGTAGGCTGAACGATAGAACAGCTACaatatttccatgttaaaatgttatgggatgcattttctacattgtttttgatggtaggcaactctggtaggcctacattaagaTTGAATAGCCACAGTAGACTACTTGACCACTGTTAAAACAAACTTAAAGTGGTTATCAGTGTTCAGTCATCAGTGTTCAGTTAATGCGTGCTGGAAGTTGCACAACATTTTCACAGCCTTCAAGTTTGCACTTAGCatacctgaaatttgctcagtgatgAAAAAACATTTCTGGGAATATTGGTGATAACTCTCTTGTTTTTTGAAAGAAATACTTTCCCCAAAACCTTTTAAATTAAATGTTAACAGCAAAGTAGGCTTACCTAGTAGAAGTATATCATGAGTAAGTATATCATTTGTATCTATTATTTGCAAACGTTGAAATGAAATGAGCAACAGCAGTACAGATCCATCACTAAGATGGCTCATGTAGATGGCACTTTCTGTCTTCTTCTTATTATTCTTCTCTACGTTTTACTGGCGAATCGCAACCAACTGACAGGTGCATACACCTACAGTCCTGAGGTCGTGACCAGCCTCACACTCATCTATTCTCACTATATTCTAACCCTGGATTTCTAAAACCTCACTACTCCCATCACCCCCACCCAAAATACCACCCACTCCCTATTCCCATCCAACCTCTTTGACCCTGTCATACAAACTCTCCCTTTCTACATCATACAGTTAACAAAATAATAGTACATGTTCAACCGTCTCCTCTCCATTACACATTCCAGTACCATGTTTCCCTATCAATTTCAAAGATAAATTCAATCCCGAATGCCCTAATCTTATCCTATACAACATAACCTCCCTTCTGTTCCCATTTAATGGCAGTATGTCCCGTACAGATTTCCTTGTACTATAAAAAGTCTGCCCTTACTACTTTCCTCCCATTGTCTCTGCCAGCAatccgattttgcaggttttccaacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtgagagacggagtctaaaacaaaaatccagaaaatcacattgtatgatttttaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU585060 True 1100 lncRNA 0.38 1 48895592 48896691

Neighbor

gene id symbol gene type direction distance location
LOC110526076 LOC106587004 coding downstream 145220 48672475 ~ 48750372 (-)
prdm12b LOC106587007 coding downstream 265204 48625747 ~ 48630388 (-)
c5 c5 coding downstream 270157 48551620 ~ 48625435 (-)
rab14 LOC106587009 coding downstream 354706 48535685 ~ 48540886 (-)
LOC118964892 LOC106585477 coding downstream 508516 48375946 ~ 48387076 (-)
surf4l LOC106587003 coding upstream 2653 48899344 ~ 48944876 (-)
LOC110526068 LOC106586971 coding upstream 298497 49195188 ~ 49220181 (-)
serpind1 LOC106603687 coding upstream 336893 49233584 ~ 49240694 (-)
LOC118964899 LOC106585521 coding upstream 417534 49314225 ~ 49316393 (-)
LOC110512258 LOC106585521 coding upstream 419588 49316279 ~ 49320412 (-)
G515785 NA non-coding downstream 24 48894459 ~ 48895568 (-)
G515783 NA non-coding downstream 2661 48892729 ~ 48892931 (-)
G515782 NA non-coding downstream 3857 48890934 ~ 48891735 (-)
G515772 NA non-coding downstream 23292 48871991 ~ 48872300 (-)
G515703 NA non-coding downstream 128608 48752379 ~ 48766984 (-)
G515819 NA non-coding upstream 40966 48937657 ~ 48937872 (-)
G515823 NA non-coding upstream 41886 48938577 ~ 48938894 (-)
G515822 NA non-coding upstream 44935 48941626 ~ 48941835 (-)
G516128 NA non-coding upstream 58945 48955636 ~ 48955857 (-)
G515139 LOC106585477 other downstream 575004 48319747 ~ 48320588 (-)
LOC110512142 LOC106585477 other downstream 577185 48292846 ~ 48318495 (-)
G515122 LOC106585477 other downstream 630615 48263993 ~ 48264977 (-)
LOC110512256 LOC106585521 other upstream 450779 49346858 ~ 49349193 (-)
LOC118936342 LOC106585521 other upstream 483131 49379716 ~ 49385907 (-)
G516320 LOC106585521 other upstream 638524 49535215 ~ 49536285 (-)
LOC110515945 LOC106585521 other upstream 726358 49622196 ~ 49624916 (-)

Expression


Co-expression Network