G516299


Basic Information

Item Value
gene id G516299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 49232522 ~ 49233050 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU585659
ttgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtctgttaaaagcgcagagagcatcatgaagaacaaggaacacaccagacaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaaccacatatgtcagagtcaaggcccgcgggccacatccggcccgcaagaaggttttttacggcccctgggatgatcttgatttattattagaaccggcccgcagcaagccggcagcccgcagatcttttacacgcaccaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU585659 True 529 lncRNA 0.46 1 49232522 49233050

Neighbor

gene id symbol gene type direction distance location
LOC110526068 LOC106586971 coding downstream 12341 49195188 ~ 49220181 (-)
surf4l LOC106587003 coding downstream 287646 48899344 ~ 48944876 (-)
LOC110526076 LOC106587004 coding downstream 482150 48672475 ~ 48750372 (-)
prdm12b LOC106587007 coding downstream 602134 48625747 ~ 48630388 (-)
c5 c5 coding downstream 607087 48551620 ~ 48625435 (-)
serpind1 LOC106603687 coding upstream 534 49233584 ~ 49240694 (-)
LOC118964899 LOC106585521 coding upstream 81175 49314225 ~ 49316393 (-)
LOC110512258 LOC106585521 coding upstream 83229 49316279 ~ 49320412 (-)
LOC110512256 LOC106585521 coding upstream 113808 49346858 ~ 49349193 (-)
LOC118936342 LOC106585521 coding upstream 146666 49379716 ~ 49385907 (-)
G516298 NA non-coding downstream 3442 49228064 ~ 49229080 (-)
G516293 NA non-coding downstream 9876 49222387 ~ 49222646 (-)
G516257 NA non-coding downstream 45198 49183879 ~ 49187324 (-)
G516275 NA non-coding downstream 57205 49175051 ~ 49175317 (-)
G516183 NA non-coding downstream 169262 49045784 ~ 49063260 (-)
G516300 NA non-coding upstream 93 49233143 ~ 49233521 (-)
G516347 NA non-coding upstream 66460 49299510 ~ 49324004 (-)
G516304 NA non-coding upstream 66675 49299725 ~ 49342499 (-)
G516364 NA non-coding upstream 134949 49367999 ~ 49371049 (-)
G516369 NA non-coding upstream 168791 49401841 ~ 49419385 (-)
LOC118964892 LOC106585477 other downstream 852216 48375946 ~ 48387076 (-)
G515139 LOC106585477 other downstream 911934 48319747 ~ 48320588 (-)
LOC110512142 LOC106585477 other downstream 914115 48292846 ~ 48318495 (-)
G515122 LOC106585477 other downstream 967545 48263993 ~ 48264977 (-)
G516320 LOC106585521 other upstream 302165 49535215 ~ 49536285 (-)
LOC110515945 LOC106585521 other upstream 389999 49622196 ~ 49624916 (-)

Expression


Co-expression Network