Gene
RNA
| Item | Value |
|---|---|
| gene id | G516047 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 49357761 ~ 49359016 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU585372 | True | 871 | lncRNA | 0.39 | 2 | 49357761 | 49359016 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964903 | NA | coding | upstream | 54405 | 49302665 ~ 49303356 (+) |
| LOC110526066 | LOC106584148 | coding | upstream | 111261 | 49233579 ~ 49260632 (+) |
| LOC118964897 | NA | coding | upstream | 167954 | 49188175 ~ 49189807 (+) |
| edf1 | edf1 | coding | upstream | 170427 | 49183291 ~ 49187334 (+) |
| LOC110526069 | LOC106586970 | coding | upstream | 201759 | 49146127 ~ 49156002 (+) |
| LOC118964898 | LOC106585477 | coding | downstream | 3014 | 49347319 ~ 49387212 (+) |
| LOC118936463 | LOC106585477 | coding | downstream | 159576 | 49518592 ~ 49522715 (+) |
| LOC118965033 | LOC106585477 | coding | downstream | 194013 | 49553029 ~ 49566639 (+) |
| cfap77 | cfap77 | coding | downstream | 315125 | 49674141 ~ 49747277 (+) |
| barhl1a | barhl1 | coding | downstream | 389772 | 49748788 ~ 49753260 (+) |
| G516012 | NA | non-coding | upstream | 22656 | 49283715 ~ 49335105 (+) |
| G516038 | LOC106585477 | non-coding | upstream | 23779 | 49333040 ~ 49333982 (+) |
| G516006 | NA | non-coding | upstream | 67287 | 49270614 ~ 49290474 (+) |
| G515986 | NA | non-coding | upstream | 124766 | 49232511 ~ 49232995 (+) |
| G516050 | NA | non-coding | downstream | 7803 | 49366819 ~ 49411934 (+) |
| G516029 | NA | non-coding | downstream | 144516 | 49503532 ~ 49506083 (+) |
| G516089 | NA | non-coding | downstream | 188965 | 49547981 ~ 49565332 (+) |
| G516093 | NA | non-coding | downstream | 198953 | 49557969 ~ 49567767 (+) |
| G516094 | NA | non-coding | downstream | 199164 | 49558180 ~ 49582072 (+) |
| G516011 | NA | other | upstream | 50621 | 49305125 ~ 49307140 (+) |
| LOC110526072 | LOC106587002 | other | upstream | 403470 | 48948617 ~ 49037542 (+) |
| G515189 | LOC100135962 | other | upstream | 769873 | 48532377 ~ 48587888 (+) |
| LOC118964907 | NA | other | downstream | 1361385 | 50719208 ~ 50743120 (+) |
| LOC110526128 | NA | other | downstream | 1552812 | 50911697 ~ 50922106 (+) |
| LOC110493840 | LOC106605670 | other | downstream | 2919477 | 52277694 ~ 52279409 (+) |
