G516050


Basic Information

Item Value
gene id G516050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 49366819 ~ 49411934 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU585375
agttggtgcttaaagctagtgagggagataagtgtttccagtttcagagatttttgtagttcgtcccagtcattggcagcagagaactggaaggagaggtggccaaagaaataattggttttgggggtgaccagagagatatacctgctggagcgcgtgctacaggtgggtgatgctatggtgaccagcgagctgagataaggggggactttacctagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU585375 True 219 lncRNA 0.49 2 49366819 49411934

Neighbor

gene id symbol gene type direction distance location
LOC118964903 NA coding upstream 63463 49302665 ~ 49303356 (+)
LOC110526066 LOC106584148 coding upstream 120319 49233579 ~ 49260632 (+)
LOC118964897 NA coding upstream 177012 49188175 ~ 49189807 (+)
edf1 edf1 coding upstream 179485 49183291 ~ 49187334 (+)
LOC110526069 LOC106586970 coding upstream 210817 49146127 ~ 49156002 (+)
LOC118936463 LOC106585477 coding downstream 106658 49518592 ~ 49522715 (+)
LOC118965033 LOC106585477 coding downstream 141095 49553029 ~ 49566639 (+)
cfap77 cfap77 coding downstream 262207 49674141 ~ 49747277 (+)
barhl1a barhl1 coding downstream 336854 49748788 ~ 49753260 (+)
spaca9 NA coding downstream 483914 49895848 ~ 49897364 (+)
G516047 NA non-coding upstream 7803 49357761 ~ 49359016 (+)
G516012 NA non-coding upstream 31714 49283715 ~ 49335105 (+)
G516038 LOC106585477 non-coding upstream 32837 49333040 ~ 49333982 (+)
G516006 NA non-coding upstream 76345 49270614 ~ 49290474 (+)
G516029 NA non-coding downstream 91598 49503532 ~ 49506083 (+)
G516089 NA non-coding downstream 136047 49547981 ~ 49565332 (+)
G516093 NA non-coding downstream 146035 49557969 ~ 49567767 (+)
G516094 NA non-coding downstream 146246 49558180 ~ 49582072 (+)
G516096 NA non-coding downstream 147762 49559696 ~ 49583560 (+)
G516011 NA other upstream 59679 49305125 ~ 49307140 (+)
LOC110526072 LOC106587002 other upstream 412528 48948617 ~ 49037542 (+)
G515189 LOC100135962 other upstream 778931 48532377 ~ 48587888 (+)
LOC118964907 NA other downstream 1308467 50719208 ~ 50743120 (+)
LOC110526128 NA other downstream 1499894 50911697 ~ 50922106 (+)
LOC110493840 LOC106605670 other downstream 2866559 52277694 ~ 52279409 (+)
G519603 NA other downstream 3240006 52651940 ~ 52655297 (+)

Expression


Co-expression Network