G516384


Basic Information

Item Value
gene id G516384
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 49463943 ~ 49494964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU585773
ggggggggggcgattgaatcaattttagaataagcctgtaacgtaacaatgtggaaaaggtcaaggggtctgaatactttctgaatgcactttatGTAATGAAAATATCAGCTGGTTGCCACTATAGATAGCTAGGTTATCCagtgcagtggtaatactgcctgcCTTGGGAGATAACGTAGGATGCGTGCTTATCCGGGTGCCAGAGACACAATCACAAGCTTTCTTCAGACTACATAGCTCAAACTTACAACGTAAAGATATGATTATCACTACATAGGTTTTTTTTAACAAGAAGGGTGTTTTCTATATCTACCAACTATGAAATTACAGACATCATAAACGGTAAGCATGAGAATAATATCATCAAGGCGGACAGGGACAATGTATGAATACACAAAACATTATTCAAATGGACATTCCCCAAATGAGCTATGCACCAGCCCATAGCCACAGGATATCTATGGAGTAACATTAATATAttcatcaatttaaaaaaaggcatgaatattgtttttctgcttttctgatctTAAACCCTGGATGTtggtccaggtttcctccaagGGAGACCTTCTGAAACAGTTGCGAAGGAAACAGCCGACAGTTACAGTACTGTGTTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU585773 True 626 lncRNA 0.39 2 49463943 49494964

Neighbor

gene id symbol gene type direction distance location
LOC118964901 LOC106585521 coding downstream 31832 49427056 ~ 49432111 (-)
LOC118964902 LOC106585521 coding downstream 40123 49422429 ~ 49423820 (-)
LOC118936342 LOC106585521 coding downstream 78036 49379716 ~ 49385907 (-)
LOC110512256 LOC106585521 coding downstream 114750 49346858 ~ 49349193 (-)
LOC110512258 LOC106585521 coding downstream 143585 49316279 ~ 49320412 (-)
LOC118964904 LOC106585521 coding upstream 1331 49496295 ~ 49499652 (-)
LOC118965034 LOC106585521 coding upstream 74108 49568244 ~ 49571133 (-)
LOC118964906 LOC106585521 coding upstream 97361 49592325 ~ 49594185 (-)
LOC118964905 LOC106585521 coding upstream 99400 49594364 ~ 49600187 (-)
LOC110515945 LOC106585521 coding upstream 127232 49622196 ~ 49624916 (-)
G516369 NA non-coding downstream 44558 49401841 ~ 49419385 (-)
G516364 NA non-coding downstream 92894 49367999 ~ 49371049 (-)
G516304 NA non-coding downstream 121444 49299725 ~ 49342499 (-)
G516347 NA non-coding downstream 139939 49299510 ~ 49324004 (-)
G516394 NA non-coding upstream 32907 49527871 ~ 49542101 (-)
G516320 LOC106585521 non-coding upstream 40251 49535215 ~ 49536285 (-)
G516401 NA non-coding upstream 70143 49565107 ~ 49589137 (-)
prdm12b LOC106587007 other downstream 833638 48625747 ~ 48630388 (-)
LOC118964892 LOC106585477 other downstream 1083637 48375946 ~ 48387076 (-)
G517777 LOC106587028 other upstream 1150399 50636549 ~ 50740638 (-)
G517877 NA other upstream 1416850 50911814 ~ 50922098 (-)
LOC110526143 LOC106587046 other upstream 2073014 51563139 ~ 51643817 (-)

Expression


Co-expression Network