G516394


Basic Information

Item Value
gene id G516394
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 49527871 ~ 49542101 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU585787
atgaaaaatggatcaatgatggcaaaaagaccggtgacgtcgatcgccaaccaccgcccgaacaaggagaggcttcgacttccGCAGACGTTGTGACACCCACAGGGTGGGATTTTTCATACATGCAGGATTTTCTTTCCCAATGTACCTCTAAATGTATTCTGCTCAACCAGTATCTCCGTCTCAGACAGATGACAACAAATCCCCAGCCGTGATGCTATCCTGACTGAAGCATTGTCAACACAAATATTGATAATATCTCTCTGACTGGAATAAGGTTCTCATTGGCAAGGCTTTTCTTCGTCAAAGGGAGACATCCATACAATGGTAAAAGAACACCCGGATCCCACTTTCTCTCACATTTGACACCGTTCAGAGGTAAATCAGGCACTCCTGAGATAAACACTTCATAGGATGCCTGCCCTGTGCCTGAGCAGAAAGATGAAACTGACTCTGAAAGCCCCACCAGCTCTACCCAGTACTGCTTTATCTGCTCTGTCGGAATGCGGGAGACACTGTCAAAGGAGATGAGGATATCAAAACACAATGCTACACTCCAAAGTGCTGCCGTGGGGCCTTCCTGAGCTGAACAAACTAGCTGTAAAACCTCTCGCTTTCACTGGCTTCTAGATCAGAGCGCTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU585787 True 645 lncRNA 0.47 2 49527871 49542101
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118964904 LOC106585521 coding downstream 28219 49496295 ~ 49499652 (-)
LOC118964900 LOC106585521 coding downstream 58604 49465910 ~ 49469267 (-)
LOC118964901 LOC106585521 coding downstream 95760 49427056 ~ 49432111 (-)
LOC118964902 LOC106585521 coding downstream 104051 49422429 ~ 49423820 (-)
LOC118936342 LOC106585521 coding downstream 141964 49379716 ~ 49385907 (-)
LOC118965034 LOC106585521 coding upstream 26971 49568244 ~ 49571133 (-)
LOC118964906 LOC106585521 coding upstream 50224 49592325 ~ 49594185 (-)
LOC118964905 LOC106585521 coding upstream 52263 49594364 ~ 49600187 (-)
LOC110515945 LOC106585521 coding upstream 80095 49622196 ~ 49624916 (-)
ddx31 ddx31 coding upstream 217528 49759629 ~ 49813236 (-)
G516386 NA non-coding downstream 23489 49471431 ~ 49504382 (-)
G516384 NA non-coding downstream 32907 49463943 ~ 49494964 (-)
G516369 NA non-coding downstream 108486 49401841 ~ 49419385 (-)
G516364 NA non-coding downstream 156822 49367999 ~ 49371049 (-)
G516401 NA non-coding upstream 23006 49565107 ~ 49589137 (-)
G516452 NA non-coding upstream 129858 49671959 ~ 49672168 (-)
LOC110512256 LOC106585521 other downstream 178735 49346858 ~ 49349193 (-)
LOC110512258 LOC106585521 other downstream 207459 49316279 ~ 49320412 (-)
prdm12b LOC106587007 other downstream 897566 48625747 ~ 48630388 (-)
LOC118964892 LOC106585477 other downstream 1147565 48375946 ~ 48387076 (-)
G517777 LOC106587028 other upstream 1103262 50636549 ~ 50740638 (-)
G517877 NA other upstream 1369713 50911814 ~ 50922098 (-)
LOC110526143 LOC106587046 other upstream 2025877 51563139 ~ 51643817 (-)
G520661 LOC106587056 other upstream 3600114 53142215 ~ 53162922 (-)

Expression

G516394 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G516394 Expression in each Bioproject

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G516394 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network