XLOC_024357 (CABZ01072254.1)


Basic Information

Item Value
gene id XLOC_024357
gene name CABZ01072254.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 265360 ~ 269284 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00048179
atgtgtgcatgtgtttgtgtttgtgtgtgcaggtcTGAGCCGCAGCGTCTGCAGCCGGTGCAGTTGGCCGTGGTGGCGTGCGGATCCAGACTGCAGGAGACTCTCACCATGATCAAATCCGCCGTCATCTTCAGCCGCAGTGAACTGCACTTCCACATCTTCGCTGAGGAGGATCTGCATGCTGGATTCAGAGACACGCTGCAGTCATGGCCGCAGAGGGTTCGCTCCAGGTTCAGCTACAGCATTTATCCCATTAGCTTCCCATCAGAGAACGCCAGAGAGTGGAGGAAACTCTTCAAACCCTGCGCTTCACAGAGACTCTTCCTGCCTctgatCCTGAAGCAGGTGGACTCAGTGCTGTATGTGGACACTGATATCCTCTTCCTGCGGCCGGTGGAGGACATCTGGAGCTTCCTGTCCTCGTTCAACCGCAGTCACGTGGCGGCGCTGGCACCTGAACACGAGGAGCCTCGCATGGGCTGGTACAACCGCTTCGCTCGACACCCATACTACGGTAAAACTGGAGTCAACTCAGGAGTGATGCTGATCAACATGACGCgcatcagacacacacacttcaagaaTGATCTGTCAGCGATGGACCTGAGCTGGTCTGATCTCCTGATGCCGCTGCTGAACAAATATAAGCTGAACATCACCTGGGGGGACCAGGACCTGCTCAACATCATCTTCCACTACAACCCCGAGAGTCTGCTTGTGTTCCCCTGCCACTGGAACTATCGGCCGGATCACTGTATTTATGGCAGTAACTGCGCCGCCGCTGAACAACACGGCATCTACATCCTACACGGCAATCGAGGCGTTTACCACGATGACAAGCAGCCAGCATTCAGCGCCGTTTATAACGCCATCCAGCAGGTATCAGCTACTCCACTTAGAGTCAAACTACATGTGATGTCTGATCAGTTTTCAGTCAATGTTGCAAACTGTAGAGTGTTTTACATCAAATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000076111

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00048179 True 972 mRNA 0.53 5 265360 269284

Neighbor

gene id symbol gene type direction distance location
XLOC_024356 CU855936.1 coding downstream 9389 254462 ~ 255971 (-)
XLOC_024354 CU855936.2 coding downstream 21097 217686 ~ 244263 (-)
XLOC_024355 CABZ01113818.1 coding downstream 39396 222921 ~ 225964 (-)
XLOC_024353 FP236318.3 coding downstream 54630 207422 ~ 210730 (-)
XLOC_024351 FP236318.5 coding downstream 58146 196313 ~ 207214 (-)
XLOC_024358 NA coding upstream 3174 272458 ~ 276103 (-)
XLOC_024359 NA coding upstream 6847 276131 ~ 277363 (-)
XLOC_024360 NA coding upstream 18375 287659 ~ 294609 (-)
XLOC_024361 NA coding upstream 35724 305008 ~ 305657 (-)
XLOC_024362 prickle1a coding upstream 45324 314608 ~ 348784 (-)
XLOC_024349 NA non-coding downstream 99380 160873 ~ 165980 (-)
XLOC_024348 NA non-coding downstream 127212 137544 ~ 138148 (-)
XLOC_024363 NA non-coding upstream 91254 360538 ~ 363768 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000123_00191482_00197694 GXYLT1, GXYLT1A coding CI01000123 null 191433 ~ 197922 (-)