XLOC_024358


Basic Information

Item Value
gene id XLOC_024358
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 272458 ~ 276103 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049066
aaaataataaacaaactgaccccaaacttttgattgGTGGTGTAGATCAGTGGgttagtttattaaaataatttaataaaagaattctaatcaaatttttaataaaataataaacaaactgaccccaaacttttgattgGTGGTGTAGATCAGTGGgttagtttattaaaataatttaatgtgcATGTTGAATATAATAGACATTTGTTGATTGGCTGTGCCTTACCCTGGATGTTGTTCACCCTCTGCCTATGCATATCCAtcttatttctgtgttgttttatgtggctttacagtcAGTTGCCtattggaattatttcctacaattatcagatgatttggggtgctgtgtgcacttaattgtgctcgcAAACCATTTACATGACCTCCATTTCCCAGCTGAGTGAAATGTActtgtataccatctctataactgtatttattttatttaagatcatttataatgttttttagagctgtaaagcactccagaatctgccaGATGATTAGTAGCCCTTATTTGGTCACCGCCGGTGGTTGCTATGACACGCGAACAAAACAACAAAGTTTGGCCACGCCTCCCCATGGGTGACGTCACTGAAACTACGTATATGTCAGTCCATGCTTCGAATGCCAAAAGATTTTCTGGAGGACTCTGAGTTCGACTGAGCTGAATTGAAAGCAAACGAAACAACTTGACAGAGACATAGCCTACTCCTTTAAAACTCAcataaactgatttaaaatgacTTCAAACAAGAAATTGAAGAACATGACTGTTAAAGATCGGAAACGTAAAGTCTGTGATGAAAATGAAGAAGTTGGCCACATTCGACTGGTCTTCTCAGGAGAACTGTTGGAGGATGAATACACACTTGGTTGTTATTACATTTACTCCAAATGCAGCATTTCTAAGGCTTCGCGCTTATATGTTGGAAaaacagatCCGGATTCAGATGAAGGTAGTCCAATCCCCAGAAGTACATCTATGGAACTACTGATTCCATTGAAGAAACCAGAATCAGAAGTTTCTTTTCTAGAATAAGCAGGGATTGATTGTTATATGACTATATAAGGGAAACGCTGCATCAGGAGAGCCGACGTTTTGTGTGAACTTTAAATTCTacttttaaaagaatttaattgCTCAGTTTTTTCCCCTTTatattttgttctgttgtttttttttttatttgttcattttcattATTGTACGTTGTTTGCCATTTAAAGTTGGCACAAAGCTGTTTCTTTGTGGTCTGAAAGTTATACCCGAGTATGGAGGGAGGAGAAGGTTTGGGTACAGTAAGCTCTGTCCTGTGCAAttcatttaaagtttatttttatagcattttttacAATCATGATTATTTCAAAACAGCTTTAAAAATGgtacacattattgcattacaatcaaatatatgttattatatacaGACAAAATTAAACTGCAGTTTAATTGCATAAACGTGATGTTTATTTGTACATGTTtactgaagtgtatttgtgtattaaatgtgtgtgttgtcCTGGAAGTCCTTgatgtccccaatttctgtttaacagagatattttctcaacacatttctgcacataatagtgttaatacctcatctctaataactgatttattttctctttgccatgatgacagtaaataatattagactagatattcttcaagacacttctatacagcttaaagtgacatgtaaaggcttcactagggtaattagggtaaagttagggtaattaggcaagtcattgtataacagtggtttgttctggagacaatccaacactaatattgctgaaggggccaataatattgaccttaaaatcggtttaaaacaataaaaactgcttttattctcgctgaaataaaacaaatcagactttctccagaagaacaaatattatcagacatactgtgaacatttcctcaatctgttcaacatcatctgggaaatatttaaaatagaataa

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0015665 alcohol transmembrane transporter activity molecular_function
GO:0034632 retinol transmembrane transporter activity molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049066 True 1986 lncRNA 0.34 3 272458 276103

Neighbor

gene id symbol gene type direction distance location
XLOC_024357 CABZ01072254.1 coding downstream 3174 265360 ~ 269284 (-)
XLOC_024356 CU855936.1 coding downstream 16487 254462 ~ 255971 (-)
XLOC_024354 CU855936.2 coding downstream 28195 217686 ~ 244263 (-)
XLOC_024355 CABZ01113818.1 coding downstream 46494 222921 ~ 225964 (-)
XLOC_024353 FP236318.3 coding downstream 61728 207422 ~ 210730 (-)
XLOC_024359 NA coding upstream 28 276131 ~ 277363 (-)
XLOC_024360 NA coding upstream 11556 287659 ~ 294609 (-)
XLOC_024361 NA coding upstream 28905 305008 ~ 305657 (-)
XLOC_024362 prickle1a coding upstream 38505 314608 ~ 348784 (-)
XLOC_024363 NA coding upstream 84435 360538 ~ 363768 (-)
XLOC_024349 NA non-coding downstream 106478 160873 ~ 165980 (-)
XLOC_024348 NA non-coding downstream 134310 137544 ~ 138148 (-)
XLOC_024366 NA non-coding upstream 179216 455319 ~ 456478 (-)

Expression


Co-expression Network