Gene
RNA
| Item | Value |
|---|---|
| gene id | G516649 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 49928409 ~ 49928968 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU586056 | True | 560 | lncRNA | 0.40 | 1 | 49928409 | 49928968 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spaca9 | NA | coding | upstream | 31045 | 49895848 ~ 49897364 (+) |
| barhl1a | barhl1 | coding | upstream | 175149 | 49748788 ~ 49753260 (+) |
| cfap77 | cfap77 | coding | upstream | 181132 | 49674141 ~ 49747277 (+) |
| LOC118965033 | LOC106585477 | coding | upstream | 361770 | 49553029 ~ 49566639 (+) |
| LOC118936463 | LOC106585477 | coding | upstream | 405694 | 49518592 ~ 49522715 (+) |
| grin1b | LOC106587016 | coding | downstream | 19670 | 49948638 ~ 50001016 (+) |
| kazald3 | LOC106587018 | coding | downstream | 122236 | 50051204 ~ 50054481 (+) |
| rsph14 | rsph14 | coding | downstream | 143358 | 50072326 ~ 50086959 (+) |
| LOC110526093 | dmtn | coding | downstream | 177824 | 50106792 ~ 50208464 (+) |
| si:dkey-220o5.5 | LOC106587021 | coding | downstream | 269374 | 50198342 ~ 50299370 (+) |
| G516628 | tsc1 | non-coding | upstream | 28738 | 49897436 ~ 49899671 (+) |
| G516489 | NA | non-coding | upstream | 166799 | 49713585 ~ 49761610 (+) |
| G516443 | NA | non-coding | upstream | 258467 | 49669740 ~ 49669942 (+) |
| G516441 | NA | non-coding | upstream | 259863 | 49668249 ~ 49668546 (+) |
| G516659 | NA | non-coding | downstream | 7351 | 49936319 ~ 49936792 (+) |
| G516661 | NA | non-coding | downstream | 9978 | 49938946 ~ 49939253 (+) |
| G516664 | NA | non-coding | downstream | 12452 | 49941420 ~ 49941621 (+) |
| G516674 | NA | non-coding | downstream | 30344 | 49959312 ~ 49960013 (+) |
| G516691 | NA | non-coding | downstream | 77313 | 50006281 ~ 50006631 (+) |
| LOC118964898 | LOC106585477 | other | upstream | 541197 | 49347319 ~ 49387212 (+) |
| G516011 | NA | other | upstream | 621269 | 49305125 ~ 49307140 (+) |
| LOC110526066 | LOC106584148 | other | upstream | 681956 | 49233579 ~ 49260632 (+) |
| edf1 | edf1 | other | upstream | 741086 | 49183291 ~ 49187334 (+) |
| LOC118964907 | NA | other | downstream | 791433 | 50719208 ~ 50743120 (+) |
| LOC110526128 | NA | other | downstream | 982860 | 50911697 ~ 50922106 (+) |
| LOC110493840 | LOC106605670 | other | downstream | 2349525 | 52277694 ~ 52279409 (+) |
| G519603 | NA | other | downstream | 2722972 | 52651940 ~ 52655297 (+) |
| G521552 | prmt3 | other | downstream | 3996974 | 53925942 ~ 53955130 (+) |
