G516918


Basic Information

Item Value
gene id G516918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 50384006 ~ 50385057 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU586357
atatttttatgtAATAATTTGCACAAAATAattacctgtttttgcttttgtcattatggagtattgtgtgtagattgatgagaagaaaaacaacaatttaatccaagaatatatacactaccgttcaaaagtttggggtcacttagaaatgtccttgtccataaaaataacatcaaactgatcagaaatacagtgtagacattgttaatgttgtctcaacgtcaacagtgacgcTACTccagcatcccggagtcgcctcctcactgttgacgttgagactggtgttttgcgtgtattacttaatgaagctgccagttgaggacttgtgaggtgtctgtttctcaaactagacactaatgtacttgtcctcttgctcagttgtacacagagtcctcccactcctctttctattctgtttagagccagtttgcgctgttctgtgaagggagtagtacagagcgttgtacgagatcttcagtttcttggcaatttctcgcttggaatagccttcatttctcagaacaagaatagactgatgagcttcagaagaaagtctttctTTTTGGACAttatgagcctgtaatcgaacacacaaatgctgatgctccagatactcaactagtctaaagaatacCAGTTTATTGCtgctttaatcagcacaacagttttcatctgtgctaacataattgcaaaagagttttctaatgatcaattagccttttaaaattatacacttggattagctagcacaacgtgccattggaacacaggagtgatggttgctggtaatgagcctctgtactcctatgtagatatttcataaaaaatgtgccgtttccagctacaatagttatttacaaaaaaattgcttttctttcaaaaacaaggacgtttctaaatgaccccaaacttttgtgtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU586357 True 919 lncRNA 0.38 2 50384006 50385057

Neighbor

gene id symbol gene type direction distance location
fam160b2 LOC106587022 coding upstream 71233 50300082 ~ 50312773 (+)
si:dkey-220o5.5 LOC106587021 coding upstream 84636 50198342 ~ 50299370 (+)
LOC110526093 dmtn coding upstream 186876 50106792 ~ 50208464 (+)
rsph14 rsph14 coding upstream 297047 50072326 ~ 50086959 (+)
kazald3 LOC106587018 coding upstream 329525 50051204 ~ 50054481 (+)
ogdha LOC106587025 coding downstream 58459 50443516 ~ 50513889 (+)
LOC110525036 NA coding downstream 145005 50530062 ~ 50535333 (+)
LOC110526111 zmiz2 coding downstream 156636 50541693 ~ 50630258 (+)
LOC118964908 LOC106587027 coding downstream 278949 50664006 ~ 50670797 (+)
LOC110526117 LOC106587027 coding downstream 326329 50711386 ~ 50719146 (+)
G516751 NA non-coding upstream 281946 50101832 ~ 50102060 (+)
G516748 NA non-coding upstream 287557 50096208 ~ 50096449 (+)
G516745 NA non-coding upstream 291556 50092075 ~ 50092450 (+)
G516744 NA non-coding upstream 292421 50091167 ~ 50091585 (+)
G516933 NA non-coding downstream 48675 50433732 ~ 50433997 (+)
G516964 NA non-coding downstream 88472 50473529 ~ 50506298 (+)
G517000 NA non-coding downstream 134782 50519839 ~ 50536407 (+)
G516990 NA non-coding downstream 304845 50689902 ~ 50699685 (+)
G517068 NA non-coding downstream 377273 50762330 ~ 50763117 (+)
barhl1a barhl1 other upstream 632257 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 996794 49347319 ~ 49387212 (+)
G516011 NA other upstream 1076866 49305125 ~ 49307140 (+)
LOC110526066 LOC106584148 other upstream 1137553 49233579 ~ 49260632 (+)
edf1 edf1 other upstream 1196683 49183291 ~ 49187334 (+)
LOC118964907 NA other downstream 335344 50719208 ~ 50743120 (+)
LOC110526128 NA other downstream 526771 50911697 ~ 50922106 (+)
LOC110493840 LOC106605670 other downstream 1893436 52277694 ~ 52279409 (+)
G519603 NA other downstream 2266883 52651940 ~ 52655297 (+)
G521552 prmt3 other downstream 3540885 53925942 ~ 53955130 (+)

Expression


Co-expression Network