Gene
RNA
| Item | Value |
|---|---|
| gene id | G517000 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 50519839 ~ 50536407 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU586449 | True | 268 | lncRNA | 0.43 | 2 | 50519839 | 50536407 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ogdha | LOC106587025 | coding | upstream | 5950 | 50443516 ~ 50513889 (+) |
| adam9 | adam9 | coding | upstream | 101857 | 50340035 ~ 50417982 (+) |
| fam160b2 | LOC106587022 | coding | upstream | 207066 | 50300082 ~ 50312773 (+) |
| si:dkey-220o5.5 | LOC106587021 | coding | upstream | 220469 | 50198342 ~ 50299370 (+) |
| LOC110526093 | dmtn | coding | upstream | 322709 | 50106792 ~ 50208464 (+) |
| LOC110526111 | zmiz2 | coding | downstream | 5286 | 50541693 ~ 50630258 (+) |
| LOC118964908 | LOC106587027 | coding | downstream | 127599 | 50664006 ~ 50670797 (+) |
| LOC110526117 | LOC106587027 | coding | downstream | 174979 | 50711386 ~ 50719146 (+) |
| LOC118964907 | NA | coding | downstream | 182801 | 50719208 ~ 50743120 (+) |
| LOC110526112 | LOC106587027 | coding | downstream | 210874 | 50747281 ~ 50761069 (+) |
| G516964 | NA | non-coding | upstream | 13541 | 50473529 ~ 50506298 (+) |
| G516933 | NA | non-coding | upstream | 85842 | 50433732 ~ 50433997 (+) |
| G516918 | NA | non-coding | upstream | 134782 | 50384006 ~ 50385057 (+) |
| G516751 | NA | non-coding | upstream | 417779 | 50101832 ~ 50102060 (+) |
| G516990 | NA | non-coding | downstream | 153495 | 50689902 ~ 50699685 (+) |
| G517068 | NA | non-coding | downstream | 225923 | 50762330 ~ 50763117 (+) |
| G517069 | NA | non-coding | downstream | 227309 | 50763716 ~ 50764117 (+) |
| G517101 | NA | non-coding | downstream | 236117 | 50772524 ~ 50773077 (+) |
| G517102 | NA | non-coding | downstream | 236939 | 50773346 ~ 50773606 (+) |
| barhl1a | barhl1 | other | upstream | 768090 | 49748788 ~ 49753260 (+) |
| LOC118964898 | LOC106585477 | other | upstream | 1132627 | 49347319 ~ 49387212 (+) |
| G516011 | NA | other | upstream | 1212699 | 49305125 ~ 49307140 (+) |
| LOC110526066 | LOC106584148 | other | upstream | 1273386 | 49233579 ~ 49260632 (+) |
| edf1 | edf1 | other | upstream | 1332516 | 49183291 ~ 49187334 (+) |
| LOC110526128 | NA | other | downstream | 375421 | 50911697 ~ 50922106 (+) |
| LOC110493840 | LOC106605670 | other | downstream | 1742086 | 52277694 ~ 52279409 (+) |
| G519603 | NA | other | downstream | 2115533 | 52651940 ~ 52655297 (+) |
| G521552 | prmt3 | other | downstream | 3389535 | 53925942 ~ 53955130 (+) |
