G517159


Basic Information

Item Value
gene id G517159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 50887275 ~ 50887712 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU586635
TGCGGGTATGCTGTGAGGGttggctagtctacatgatgacattattatggataagagcgagaatatttgtatttctcaaatggcagtcaagcaacactgtgaagttcatcatcatttattcCATCAaatggcgattttagcatgttcATCTTGGTGAGGCAATCTCCCCAAAACATTGTTTGATGTATGCCAGCAAAGCCATTAatcaacacaacactaaacaatacataaaTTGCACTTTAACGTTGACAAACTGTGCCTACAAACTGTtaggacatacagttgaagtcggaagtttacatacacattagccaaatacatttaaactcagtttttcacaattcctgacatttaatcctagtaaaaattccctgtcttaggtcagttaggattaccactttattttaagaatgtgaaatgtcagaataatagtagaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU586635 True 438 lncRNA 0.36 1 50887275 50887712

Neighbor

gene id symbol gene type direction distance location
LOC110526125 LOC106587031 coding upstream 40676 50817728 ~ 50846599 (+)
tti2 tti2 coding upstream 96222 50784211 ~ 50791053 (+)
LOC110526112 LOC106587027 coding upstream 126206 50747281 ~ 50761069 (+)
LOC118964907 NA coding upstream 144155 50719208 ~ 50743120 (+)
LOC110526117 LOC106587027 coding upstream 168129 50711386 ~ 50719146 (+)
LOC110526127 LOC106586990 coding downstream 11384 50899096 ~ 50901094 (+)
LOC110526128 NA coding downstream 23985 50911697 ~ 50922106 (+)
LOC110526132 LOC106587036 coding downstream 103861 50991573 ~ 51017128 (+)
znf608 znf608 coding downstream 226274 51113986 ~ 51128144 (+)
LOC110526137 cep120 coding downstream 271722 51159434 ~ 51225264 (+)
G517115 spinz non-coding upstream 79918 50804663 ~ 50807357 (+)
G517108 NA non-coding upstream 104853 50781949 ~ 50782422 (+)
G517102 NA non-coding upstream 113669 50773346 ~ 50773606 (+)
G517101 NA non-coding upstream 114198 50772524 ~ 50773077 (+)
G517069 NA non-coding upstream 123158 50763716 ~ 50764117 (+)
G517166 NA non-coding downstream 15986 50903698 ~ 50903955 (+)
G517181 NA non-coding downstream 65719 50953431 ~ 50953865 (+)
G517186 NA non-coding downstream 71228 50958940 ~ 50959139 (+)
barhl1a barhl1 other upstream 1135526 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 1500063 49347319 ~ 49387212 (+)
G516011 NA other upstream 1580135 49305125 ~ 49307140 (+)
LOC110526066 LOC106584148 other upstream 1640822 49233579 ~ 49260632 (+)
LOC110493840 LOC106605670 other downstream 1390781 52277694 ~ 52279409 (+)
G519603 NA other downstream 1764228 52651940 ~ 52655297 (+)
G521552 prmt3 other downstream 3038230 53925942 ~ 53955130 (+)
G521914 NA other downstream 3382213 54269925 ~ 54270259 (+)

Expression


Co-expression Network