XLOC_024366



Basic Information


Item Value
gene id XLOC_024366
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 455319 ~ 456478 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00049299
gcttagtcccttatttatcaggctccgccacagcagaatgaaccggcaacaattctagcatatgttttacagggggaacatgcaaactccacacagaaacaacaacagacccagtcgggacttgaaccagcaaccttcttgctgtgaggcaacagtgctgaccactgagccaccatgtcgcccatcTTCCCAAATAATAGTTTGCatttcaaatataaaacagaaaagtaCAAATGTTTTGTCTGATAAATATACCTTCCAGTAGAGTTCTCTGATACACAGTGGCGCTCCAAGGACTGGACATCTGATCCATATGCAGACGCACAGCAAACTCGTAGCGTGTGTTCGGCTGGAGACCTGTTACCATCACGGTTTGCTCAGagctagagagagagaaaacatgaCGACTGAATACACAAGCTAATCTGCTGttgaaggaacactccactttttgtgGAAACAGCCTCATTTTACAGCTCTTCAGAAGTTTAACAGCATCACTTACGTCTGGATGTAGCGTACGCTGGAGGCTTCAGACGGACTCGCGGGCCCGTAGCGGACGGAGAAAGTGACCGGTTTTCCAGAGCTGAACGCAGGACGACCCCAACTCAGATGCACCGCAGACGAGCTGTTAGCTTTAGCATGGGTGTGGTCTGGAGGCGGAAGAGCAGCTAATCGGCGGTTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00049299 True 685 lncRNA 0.49 2 455319 456478

Neighbor


gene id symbol gene type direction distance location
XLOC_024364 szl coding downstream 79437 371164 ~ 375882 (-)
XLOC_024363 NA coding downstream 91551 360538 ~ 363768 (-)
XLOC_024362 prickle1a coding downstream 106535 314608 ~ 348784 (-)
XLOC_024361 NA coding downstream 149662 305008 ~ 305657 (-)
XLOC_024360 NA coding downstream 160710 287659 ~ 294609 (-)
XLOC_024367 si:ch1073-385f13.3 coding upstream 23519 479997 ~ 483808 (-)
XLOC_024368 myo9ab coding upstream 28875 485353 ~ 554142 (-)
XLOC_024369 NA coding upstream 174455 630933 ~ 643106 (-)
XLOC_024370 tmem117 coding upstream 253661 710139 ~ 752158 (-)
XLOC_024371 irak4 coding upstream 311536 768014 ~ 774471 (-)
XLOC_024359 NA non-coding downstream 177956 276131 ~ 277363 (-)
XLOC_024358 NA non-coding downstream 179216 272458 ~ 276103 (-)
XLOC_024375 CU861469.1 non-coding upstream 738804 1195282 ~ 1196112 (-)
XLOC_024380 CR354429.1 non-coding upstream 1007901 1464379 ~ 1471185 (-)
XLOC_024381 NA non-coding upstream 1168402 1624880 ~ 1625918 (-)
XLOC_024382 dre-let-7i non-coding upstream 1173177 1629655 ~ 1629749 (-)

Expression



Co-expression Network