Gene
RNA
| Item | Value |
|---|---|
| gene id | G518036 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 51148157 ~ 51148377 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: vegetative cell wall protein gp1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU587613 | True | 221 | lncRNA | 0.67 | 1 | 51148157 | 51148377 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| znf608 | znf608 | coding | upstream | 20013 | 51113986 ~ 51128144 (+) |
| LOC110526132 | LOC106587036 | coding | upstream | 131029 | 50991573 ~ 51017128 (+) |
| LOC110526128 | NA | coding | upstream | 226051 | 50911697 ~ 50922106 (+) |
| LOC110526127 | LOC106586990 | coding | upstream | 247063 | 50899096 ~ 50901094 (+) |
| LOC110526125 | LOC106587031 | coding | upstream | 301558 | 50817728 ~ 50846599 (+) |
| LOC110526137 | cep120 | coding | downstream | 11057 | 51159434 ~ 51225264 (+) |
| LOC118964909 | NA | coding | downstream | 564413 | 51712790 ~ 51718231 (+) |
| homer1b | homer1 | coding | downstream | 734906 | 51883283 ~ 52006875 (+) |
| LOC110493840 | LOC106605670 | coding | downstream | 1129317 | 52277694 ~ 52279409 (+) |
| otpb | LOC106587051 | coding | downstream | 1236765 | 52385142 ~ 52390468 (+) |
| G518012 | NA | non-coding | upstream | 14262 | 51133659 ~ 51133895 (+) |
| G517998 | NA | non-coding | upstream | 38064 | 51109782 ~ 51110093 (+) |
| G517978 | NA | non-coding | upstream | 53975 | 51093943 ~ 51094182 (+) |
| G517961 | NA | non-coding | upstream | 66078 | 51081713 ~ 51082079 (+) |
| G517073 | LOC106587035 | non-coding | upstream | 163962 | 50980226 ~ 50984195 (+) |
| G518132 | NA | non-coding | downstream | 81619 | 51229996 ~ 51230526 (+) |
| G518133 | NA | non-coding | downstream | 83148 | 51231525 ~ 51231822 (+) |
| G518182 | NA | non-coding | downstream | 145811 | 51294188 ~ 51294400 (+) |
| G518185 | NA | non-coding | downstream | 152018 | 51300395 ~ 51300690 (+) |
| G518186 | NA | non-coding | downstream | 152891 | 51301268 ~ 51301538 (+) |
| LOC118964907 | NA | other | upstream | 412921 | 50719208 ~ 50743120 (+) |
| barhl1a | barhl1 | other | upstream | 1396408 | 49748788 ~ 49753260 (+) |
| LOC118964898 | LOC106585477 | other | upstream | 1760945 | 49347319 ~ 49387212 (+) |
| G516011 | NA | other | upstream | 1841017 | 49305125 ~ 49307140 (+) |
| G519603 | NA | other | downstream | 1503563 | 52651940 ~ 52655297 (+) |
| G521552 | prmt3 | other | downstream | 2777565 | 53925942 ~ 53955130 (+) |
| G521914 | NA | other | downstream | 3121548 | 54269925 ~ 54270259 (+) |
| LOC110526161 | LOC106587065 | other | downstream | 3731322 | 54793125 ~ 54954478 (+) |
