G518133


Basic Information

Item Value
gene id G518133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 51231525 ~ 51231822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU587717
aaaaaaagggCCATGCTTGAAAGGTGTATGGACGGCCTAATAAATCAGGGGCGGTGTGAGCAAGCGGAGTTCATGTTCTCCGGGTCAGATCCATAACCTCTCGACAGCTGCCCGCGCACTAGAACCAACGGCGCTGTGGGACGTGACCTTACAGACACACAACGCAGGGGCCACGGGCAGGGAGCACACCCCGCGGACACACTGATACATCACCGCCTGCTAAGATGAATCTGAGAAAACACTTTACCGCtatgtccaacacacacacaaactctctttGTAAAGAACAAACATCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU587717 True 298 lncRNA 0.52 1 51231525 51231822

Neighbor

gene id symbol gene type direction distance location
LOC110526137 cep120 coding upstream 6261 51159434 ~ 51225264 (+)
znf608 znf608 coding upstream 103381 51113986 ~ 51128144 (+)
LOC110526132 LOC106587036 coding upstream 214397 50991573 ~ 51017128 (+)
LOC110526128 NA coding upstream 309419 50911697 ~ 50922106 (+)
LOC110526127 LOC106586990 coding upstream 330431 50899096 ~ 50901094 (+)
LOC118964909 NA coding downstream 480968 51712790 ~ 51718231 (+)
homer1b homer1 coding downstream 651461 51883283 ~ 52006875 (+)
LOC110493840 LOC106605670 coding downstream 1045872 52277694 ~ 52279409 (+)
otpb LOC106587051 coding downstream 1153320 52385142 ~ 52390468 (+)
mapk8ip1b LOC106587053 coding downstream 1292534 52524356 ~ 52645645 (+)
G518132 NA non-coding upstream 999 51229996 ~ 51230526 (+)
G518036 NA non-coding upstream 83148 51148157 ~ 51148377 (+)
G518012 NA non-coding upstream 97630 51133659 ~ 51133895 (+)
G517998 NA non-coding upstream 121432 51109782 ~ 51110093 (+)
G517978 NA non-coding upstream 137343 51093943 ~ 51094182 (+)
G518182 NA non-coding downstream 62366 51294188 ~ 51294400 (+)
G518185 NA non-coding downstream 68573 51300395 ~ 51300690 (+)
G518186 NA non-coding downstream 69446 51301268 ~ 51301538 (+)
G518181 snx2 non-coding downstream 105191 51337013 ~ 51345527 (+)
G518365 NA non-coding downstream 331508 51563330 ~ 51566559 (+)
LOC118964907 NA other upstream 496289 50719208 ~ 50743120 (+)
barhl1a barhl1 other upstream 1479776 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 1844313 49347319 ~ 49387212 (+)
G516011 NA other upstream 1924385 49305125 ~ 49307140 (+)
G519603 NA other downstream 1420118 52651940 ~ 52655297 (+)
G521552 prmt3 other downstream 2694120 53925942 ~ 53955130 (+)
G521914 NA other downstream 3038103 54269925 ~ 54270259 (+)
LOC110526161 LOC106587065 other downstream 3647877 54793125 ~ 54954478 (+)

Expression


Co-expression Network