G518182


Basic Information

Item Value
gene id G518182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 51294188 ~ 51294400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU587768
GTTTTAGGAACACAAGTTCAATGAAAAGCAAGTATTGACAAGTTTATAACCGAACTGAGGCTGAGAGCACGCAACTGTGAGTTCAGAGACACTGAGGATCTAACGCTAAAGGAGAAAATTGTGTTCAGCATCCCAGACAGTGTTAGCAGAAAAATGTACCAAGTAATTCAAATTAAAAGAAATTGAGACTGTATTCATATCCCATGGTACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU587768 True 213 lncRNA 0.38 1 51294188 51294400

Neighbor

gene id symbol gene type direction distance location
LOC110526137 cep120 coding upstream 68924 51159434 ~ 51225264 (+)
znf608 znf608 coding upstream 166044 51113986 ~ 51128144 (+)
LOC110526132 LOC106587036 coding upstream 277060 50991573 ~ 51017128 (+)
LOC110526128 NA coding upstream 372082 50911697 ~ 50922106 (+)
LOC110526127 LOC106586990 coding upstream 393094 50899096 ~ 50901094 (+)
LOC118964909 NA coding downstream 418390 51712790 ~ 51718231 (+)
homer1b homer1 coding downstream 588883 51883283 ~ 52006875 (+)
LOC110493840 LOC106605670 coding downstream 983294 52277694 ~ 52279409 (+)
otpb LOC106587051 coding downstream 1090742 52385142 ~ 52390468 (+)
mapk8ip1b LOC106587053 coding downstream 1229956 52524356 ~ 52645645 (+)
G518133 NA non-coding upstream 62366 51231525 ~ 51231822 (+)
G518132 NA non-coding upstream 63662 51229996 ~ 51230526 (+)
G518036 NA non-coding upstream 145811 51148157 ~ 51148377 (+)
G518012 NA non-coding upstream 160293 51133659 ~ 51133895 (+)
G517998 NA non-coding upstream 184095 51109782 ~ 51110093 (+)
G518185 NA non-coding downstream 5995 51300395 ~ 51300690 (+)
G518186 NA non-coding downstream 6868 51301268 ~ 51301538 (+)
G518181 snx2 non-coding downstream 42613 51337013 ~ 51345527 (+)
G518365 NA non-coding downstream 268930 51563330 ~ 51566559 (+)
G518354 NA non-coding downstream 312949 51607349 ~ 51625607 (+)
LOC118964907 NA other upstream 558952 50719208 ~ 50743120 (+)
barhl1a barhl1 other upstream 1542439 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 1906976 49347319 ~ 49387212 (+)
G516011 NA other upstream 1987048 49305125 ~ 49307140 (+)
G519603 NA other downstream 1357540 52651940 ~ 52655297 (+)
G521552 prmt3 other downstream 2631542 53925942 ~ 53955130 (+)
G521914 NA other downstream 2975525 54269925 ~ 54270259 (+)
LOC110526161 LOC106587065 other downstream 3585299 54793125 ~ 54954478 (+)

Expression


Co-expression Network