G519118


Basic Information

Item Value
gene id G519118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 52031161 ~ 52031392 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU588778
agtgcatCTGCCTTCACGTtcgggaacctggtctgtaagaaagggtgaaaacaaaacaggtgaaaaacaataaagaatgggtacaaaacccgtcccGCACCAGACAACAATGtacacaagcacttacaacaaacaataccacacaaagacatggggagaacagagggttaaatacacaacacgtaatgagggaatgaaaacaagacaaaacaaatgagggaatgaagacaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU588778 True 232 lncRNA 0.42 1 52031161 52031392

Neighbor

gene id symbol gene type direction distance location
homer1b homer1 coding upstream 24286 51883283 ~ 52006875 (+)
LOC118964909 NA coding upstream 312930 51712790 ~ 51718231 (+)
LOC110526137 cep120 coding upstream 805897 51159434 ~ 51225264 (+)
znf608 znf608 coding upstream 903017 51113986 ~ 51128144 (+)
LOC110526132 LOC106587036 coding upstream 1014033 50991573 ~ 51017128 (+)
LOC110493840 LOC106605670 coding downstream 246302 52277694 ~ 52279409 (+)
otpb LOC106587051 coding downstream 353750 52385142 ~ 52390468 (+)
mapk8ip1b LOC106587053 coding downstream 492964 52524356 ~ 52645645 (+)
LOC110502468 LOC106605670 coding downstream 523613 52555005 ~ 52558912 (+)
LOC118965081 NA coding downstream 1034635 53066027 ~ 53067743 (+)
G519110 NA non-coding upstream 7074 52023748 ~ 52024087 (+)
G519109 NA non-coding upstream 7536 52023358 ~ 52023625 (+)
G518848 NA non-coding upstream 157798 51873041 ~ 51873363 (+)
G518795 NA non-coding upstream 184289 51846313 ~ 51846872 (+)
G518799 NA non-coding upstream 185237 51845646 ~ 51845924 (+)
G519306 NA non-coding downstream 119633 52151025 ~ 52151235 (+)
G519374 NA non-coding downstream 174387 52205779 ~ 52206004 (+)
G519376 NA non-coding downstream 174725 52206117 ~ 52206320 (+)
G519379 NA non-coding downstream 176404 52207796 ~ 52208990 (+)
G519388 NA non-coding downstream 185595 52216987 ~ 52217308 (+)
LOC110526128 NA other upstream 1109064 50911697 ~ 50922106 (+)
LOC118964907 NA other upstream 1295925 50719208 ~ 50743120 (+)
barhl1a barhl1 other upstream 2279412 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 2643949 49347319 ~ 49387212 (+)
G516011 NA other upstream 2724021 49305125 ~ 49307140 (+)
G519603 NA other downstream 620548 52651940 ~ 52655297 (+)
G521552 prmt3 other downstream 1894550 53925942 ~ 53955130 (+)
G521914 NA other downstream 2238533 54269925 ~ 54270259 (+)
LOC110526161 LOC106587065 other downstream 2848307 54793125 ~ 54954478 (+)

Expression


Co-expression Network