Gene
RNA
| Item | Value |
|---|---|
| gene id | G519564 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 52464049 ~ 52466190 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU589236 | True | 290 | lncRNA | 0.54 | 2 | 52464049 | 52466190 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| otpb | LOC106587051 | coding | upstream | 73581 | 52385142 ~ 52390468 (+) |
| LOC110493840 | LOC106605670 | coding | upstream | 184640 | 52277694 ~ 52279409 (+) |
| homer1b | homer1 | coding | upstream | 457174 | 51883283 ~ 52006875 (+) |
| LOC118964909 | NA | coding | upstream | 745818 | 51712790 ~ 51718231 (+) |
| LOC110526137 | cep120 | coding | upstream | 1238785 | 51159434 ~ 51225264 (+) |
| mapk8ip1b | LOC106587053 | coding | downstream | 58166 | 52524356 ~ 52645645 (+) |
| LOC110502468 | LOC106605670 | coding | downstream | 88815 | 52555005 ~ 52558912 (+) |
| LOC118965081 | NA | coding | downstream | 599837 | 53066027 ~ 53067743 (+) |
| LOC110526152 | LOC106587056 | coding | downstream | 644950 | 53111140 ~ 53202399 (+) |
| LOC118965122 | NA | coding | downstream | 692721 | 53158911 ~ 53159015 (+) |
| G519388 | NA | non-coding | upstream | 246741 | 52216987 ~ 52217308 (+) |
| G519379 | NA | non-coding | upstream | 255059 | 52207796 ~ 52208990 (+) |
| G519376 | NA | non-coding | upstream | 257729 | 52206117 ~ 52206320 (+) |
| G519374 | NA | non-coding | upstream | 258045 | 52205779 ~ 52206004 (+) |
| G519306 | NA | non-coding | upstream | 312814 | 52151025 ~ 52151235 (+) |
| G519602 | NA | non-coding | downstream | 182167 | 52648357 ~ 52649692 (+) |
| G519675 | NA | non-coding | downstream | 190014 | 52656204 ~ 52656459 (+) |
| G519685 | LOC106587054 | non-coding | downstream | 204235 | 52670425 ~ 52674545 (+) |
| G520259 | NA | non-coding | downstream | 439246 | 52905436 ~ 52905657 (+) |
| G520260 | NA | non-coding | downstream | 439532 | 52905722 ~ 52905931 (+) |
| LOC110526128 | NA | other | upstream | 1541952 | 50911697 ~ 50922106 (+) |
| LOC118964907 | NA | other | upstream | 1728813 | 50719208 ~ 50743120 (+) |
| barhl1a | barhl1 | other | upstream | 2712300 | 49748788 ~ 49753260 (+) |
| LOC118964898 | LOC106585477 | other | upstream | 3076837 | 49347319 ~ 49387212 (+) |
| G519603 | NA | other | downstream | 185750 | 52651940 ~ 52655297 (+) |
| G521552 | prmt3 | other | downstream | 1459752 | 53925942 ~ 53955130 (+) |
| G521914 | NA | other | downstream | 1803735 | 54269925 ~ 54270259 (+) |
| LOC110526161 | LOC106587065 | other | downstream | 2413509 | 54793125 ~ 54954478 (+) |
| G523529 | NA | other | downstream | 3018059 | 55484249 ~ 55484607 (+) |
