G519603


Basic Information

Item Value
gene id G519603
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 52651940 ~ 52655297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU589275
AATATTATGCTCAGGGCTTCCTTCTCAATTTGAGCATAATTTTTCTCACTTGGTGACAGCGTCTGTGATGCAAATGCAATAGGGTGTTCTTCACCTGACGGTAGAACATGTGAGATGGCGGCTCCTAATCCGTATGGAGATGCATCACACGCGAGTCTCAGCTTCATCTCTGTGTTGTAGTGGGCAAGCCACTTGCTCTTTAGCAGACACTGTTTGCAAGTCTTGAATGCTTCTTCGCATTGTGGGGACCAATTCCACTTTGTATCGGCCTGCAGCAGTTGGTGAAGCGGATGCAACAATGTGGACAAGTTTGCCACAAACTTTCCGTAATAGTTCAGGAGCCCAAAAAATGACCTCAGCTCTGAGATATTTGTGGGTGCTGGTGTGTTCACGATTGCTTCCACCTTGCTGTTGGTTGGGTGCAGGCCTTGTGCATCAATCTTGTATCCGAGATACTCCACTGAGTCCTGAAGGAACTCACACTTGCTGCGTTTCATTCTCACTCCCGTATTTCTCCAGTCTTGACATCACTTTGTCCAGCACTACAAGGTGCTCTCCAATGGTTGGTGCTGACACTAGGATGTCGTCCATGAAGCACACAACATTGTCTATACCGTCCAAGATCTGATCCATTGAATGTTGGAATATCGCTGGAGCTGTCGAGATTCCATTGGCCAAGCGATTGAATCTGAATAGTCccttgtgtgtattgatggtcAGACACTGTTCTGACTCCGGATCCAGCTTCAGTTGCTGATAAGCGAATGCCAGGTCCAGCTTACTGAAAACCTTCCCACCAGCTAGAGTGGCAAACAGATCTTCAGCGTTTGTTAGTGGATATTCCTCTGGTAGTATGCAGCGATTTACTGTGACCTTGTAGTCACCGCACATTCTGACGGTCTTGTCTTTCTTTGGGACTACAACAATCTGAGCGGCCGAGTCGCTCCTCGCTACTTTCGTGATTATGTTATTCTTCTGTAGGCGGTCCAGTTCCTTCTCTACTGCTTCCTTAAGAGCATAAGGAACTGGACGTGGTTGTGAAAGATAGGCTTGGTTCCTTCTTGCACTCAGACTTTTGCTGTGAAGTCTTGTATTTCACCGTAGGACAGGACTTTGAAAAGTTCTGTGTGCTTCTCCAGCATGTTAGCCATGTTAGCCTGACTCACTGGTTTGTCATTTCTCATACTGAAGATTTCTCCCCAGTTCAACTTGATCTTTTGTAGCCATGTTCTGCCTAGCAAGGCAGATTTTTCTCCTTTAACAATGACAAGCAGTAGCGTCCACTCCTTCCCCTAATTTCAATGGGTTCAatgacagttttttttatttaaccaccaGAGGGCAGTGTCGCTATTCTGGACTTCAGTAGTCTTGCTACTTGGCAGCTCCTGAATACTGTACCGACTAGCAGTGCTTAGCCTTCTCTACTggcgaaagaaaataaaaaataactgacGAATTACATAATTATTTTGAGTTTCATTACTCACGCAACATTCTTCCCTTCAAGCAATGTCCGTTTATGTAGTTTAATCACCTCGTCGCCactgtaatatttgtgttgtggagaaatgaccaggcaggagacgggaGTACAGTTAGTTTTTGTTTAGTCAAAACCCTTCGTGCTCTACAGTTCCCGGCATCCtagtgcgcatgtgcatttcctattaggtgtagtaaGGTAACACTGCTGTAAtacattactgcttagtaacagcatagtaactaatctaaacagatgtagatcccagatactacattaatgatcggctatgaaaagccaactgacatttactcttgaggtgctgacttgctgcaccctcgacaactactgtgattattattatttgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgctataatctccacccggcacagccagaagaggactggccacccatcatagcctggttcctctctaggtttcttcctaggttttggcctttctaggtagtttttcctagccaatgtgcttcaacacctgcatttcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacaaagggctatataactagattttattttatttgatctgtTACCCTGGTAACATAAAAGGGAATTATCTCTGACCCTCACAAAAAGGACATGAAAGGTGAAGTGTGTAGGAAATGCATGATGGGAGATTTAAAGGTAGTGCCTGACTAGGAATTACAAGGCAGGGGGAGAGTGGTATCTATGAAGGATCACTGTTGTAACTGCTATGTCATTTAGATTTACCACAATGTGTGTTGAtaggagaggttgaaaaaaagGCTGTTTTTGTGGAGGAGATATCATGTGTGTTGAGATGGTAAGAAAATAATAAAGTAAGACTAGATCAAGGATCAACATAAGATAGGAATTGAAATGGCCAATTCCTGGCCAGAGGTTTGTGCCTGGAAACAATGGCTTGGTCTGAAATCAACCAATTGCTCATACCCATTTGATGCTTGTAGATTCTGATGGAACCAGAGGTGTTTTTTATACCTTAAGTTCACTGGAAGGCTAGGTGGAGCCATCCCCCTATTGCCTACACCTTTCCAGTCTTCAGATTTGCCATCACAGAAGGAGCAGGGATTAGGGAAAAGGGCAAATAATTGTATTGTGTGGCTTTCTGACACAGTGATTTCTAATGTGGCTGCCACAGAATCACATTCTAACAAGAACTTGTAGCACAATGTATTGTTTATAAGAACTGTAATTAACTGAACATGTAAAACATTGTGAGAAGGAATGCTTGTAAAATGGGTCTCTAACTTATGAAAGCATGGGATATGAAACCACATTCATTCTACCACCTGTCAAGCATCTTCCTATGAATAGTGACATGTATTTCCAAGTCACAAGTTTACATTTTATCTTCACCATTCCTATTTTTCTTCTGAGCCAAGAAACAAAGGCCAAAATTCAGATCAGATCTGCCTTAAACCATGATAAATGACAATTGCATAGCATAtcattgtttttttgtgttgtgtgttgtaatGTACACCTTGATTAGGCTGATATACATCTGTATTATtttatatagcctacactttcacATTCGGAACTTCTAACACAGGTGGGACTGGTGTGACAATGACCTCAAGAGCAGCCATTCACcatttgacagctccaacgcaGAACACCTGTAACATCGCCTAAACAAAAacaattatatgcaatgcagTCTGTCGGTTATTGCAGGTTAAGGGGAATCTGATTGAATCATGCTTGATTTTTACGACATTCTCCGAGACTACTTCTATTTTCAGTCCCCAAACAGTCATTCTGGCCAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU589275 True 3358 TUCP 0.42 1 52651940 52655297

Neighbor

gene id symbol gene type direction distance location
mapk8ip1b LOC106587053 coding upstream 6295 52524356 ~ 52645645 (+)
LOC110502468 LOC106605670 coding upstream 93028 52555005 ~ 52558912 (+)
otpb LOC106587051 coding upstream 261472 52385142 ~ 52390468 (+)
LOC110493840 LOC106605670 coding upstream 372531 52277694 ~ 52279409 (+)
homer1b homer1 coding upstream 645065 51883283 ~ 52006875 (+)
LOC118965081 NA coding downstream 410730 53066027 ~ 53067743 (+)
LOC110526152 LOC106587056 coding downstream 455843 53111140 ~ 53202399 (+)
LOC118965122 NA coding downstream 503614 53158911 ~ 53159015 (+)
LOC118965121 NA coding downstream 507798 53163095 ~ 53163203 (+)
LOC110526153 LOC106587057 coding downstream 699481 53354778 ~ 53759596 (+)
G519602 NA non-coding upstream 2248 52648357 ~ 52649692 (+)
G519564 NA non-coding upstream 185750 52464049 ~ 52466190 (+)
G519388 NA non-coding upstream 434632 52216987 ~ 52217308 (+)
G519379 NA non-coding upstream 442950 52207796 ~ 52208990 (+)
G519376 NA non-coding upstream 445620 52206117 ~ 52206320 (+)
G519675 NA non-coding downstream 907 52656204 ~ 52656459 (+)
G519685 LOC106587054 non-coding downstream 15128 52670425 ~ 52674545 (+)
G520259 NA non-coding downstream 250139 52905436 ~ 52905657 (+)
G520260 NA non-coding downstream 250425 52905722 ~ 52905931 (+)
G520505 NA non-coding downstream 432962 53088259 ~ 53088587 (+)
LOC110526128 NA other upstream 1729843 50911697 ~ 50922106 (+)
LOC118964907 NA other upstream 1916704 50719208 ~ 50743120 (+)
barhl1a barhl1 other upstream 2900191 49748788 ~ 49753260 (+)
LOC118964898 LOC106585477 other upstream 3264728 49347319 ~ 49387212 (+)
G521552 prmt3 other downstream 1270645 53925942 ~ 53955130 (+)
G521914 NA other downstream 1614628 54269925 ~ 54270259 (+)
LOC110526161 LOC106587065 other downstream 2224402 54793125 ~ 54954478 (+)
G523529 NA other downstream 2828952 55484249 ~ 55484607 (+)
LOC110526167 LOC106587078 other downstream 2908451 55563439 ~ 55568167 (+)

Expression


Co-expression Network