Gene
RNA
| Item | Value |
|---|---|
| gene id | G520508 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 53090782 ~ 53091037 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU590237 | True | 256 | lncRNA | 0.36 | 1 | 53090782 | 53091037 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965081 | NA | coding | upstream | 23039 | 53066027 ~ 53067743 (+) |
| mapk8ip1b | LOC106587053 | coding | upstream | 445137 | 52524356 ~ 52645645 (+) |
| LOC110502468 | LOC106605670 | coding | upstream | 531870 | 52555005 ~ 52558912 (+) |
| otpb | LOC106587051 | coding | upstream | 700314 | 52385142 ~ 52390468 (+) |
| LOC110493840 | LOC106605670 | coding | upstream | 811373 | 52277694 ~ 52279409 (+) |
| LOC110526152 | LOC106587056 | coding | downstream | 20103 | 53111140 ~ 53202399 (+) |
| LOC118965122 | NA | coding | downstream | 67874 | 53158911 ~ 53159015 (+) |
| LOC118965121 | NA | coding | downstream | 72058 | 53163095 ~ 53163203 (+) |
| LOC110526153 | LOC106587057 | coding | downstream | 263741 | 53354778 ~ 53759596 (+) |
| LOC110526155 | LOC106587070 | coding | downstream | 929075 | 54020112 ~ 54035663 (+) |
| G520507 | NA | non-coding | upstream | 1148 | 53089366 ~ 53089634 (+) |
| G520505 | NA | non-coding | upstream | 2195 | 53088259 ~ 53088587 (+) |
| G520260 | NA | non-coding | upstream | 184851 | 52905722 ~ 52905931 (+) |
| G520259 | NA | non-coding | upstream | 185125 | 52905436 ~ 52905657 (+) |
| G519685 | LOC106587054 | non-coding | upstream | 416237 | 52670425 ~ 52674545 (+) |
| G520509 | LOC100136012 | non-coding | downstream | 678 | 53091715 ~ 53092164 (+) |
| G520531 | NA | non-coding | downstream | 18102 | 53109139 ~ 53109367 (+) |
| G520560 | NA | non-coding | downstream | 54678 | 53145715 ~ 53154614 (+) |
| G520753 | NA | non-coding | downstream | 189981 | 53281018 ~ 53281230 (+) |
| G520760 | NA | non-coding | downstream | 195382 | 53286419 ~ 53286990 (+) |
| G519603 | NA | other | upstream | 435485 | 52651940 ~ 52655297 (+) |
| LOC110526128 | NA | other | upstream | 2168685 | 50911697 ~ 50922106 (+) |
| LOC118964907 | NA | other | upstream | 2355546 | 50719208 ~ 50743120 (+) |
| barhl1a | barhl1 | other | upstream | 3339033 | 49748788 ~ 49753260 (+) |
| G521552 | prmt3 | other | downstream | 834905 | 53925942 ~ 53955130 (+) |
| G521914 | NA | other | downstream | 1178888 | 54269925 ~ 54270259 (+) |
| LOC110526161 | LOC106587065 | other | downstream | 1788662 | 54793125 ~ 54954478 (+) |
| G523529 | NA | other | downstream | 2393212 | 55484249 ~ 55484607 (+) |
| LOC110526167 | LOC106587078 | other | downstream | 2472711 | 55563439 ~ 55568167 (+) |
