Gene
RNA
| Item | Value |
|---|---|
| gene id | G520661 |
| gene name | LOC106587056 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 53142215 ~ 53162922 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cytoskeleton-associated protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU590396 | True | 1464 | TUCP | 0.55 | 10 | 53142215 | 53162922 |
53,128,000
53,132,000
53,136,000
53,140,000
53,144,000
53,148,000
53,152,000
53,156,000
53,160,000
53,164,000
53,168,000
53,172,000
NC_048570.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrp4 | LOC106587054 | coding | downstream | 250122 | 52673661 ~ 52892093 (-) |
| LOC110526151 | LOC106609580 | coding | downstream | 396627 | 52744519 ~ 52745588 (-) |
| LOC118965080 | NA | coding | downstream | 758885 | 52363668 ~ 52383330 (-) |
| tent2 | papd4 | coding | downstream | 1298874 | 51800346 ~ 51843341 (-) |
| cmya5 | cmya5 | coding | downstream | 1344568 | 51718652 ~ 51797647 (-) |
| LOC110526924 | LOC106587063 | coding | upstream | 665859 | 53828781 ~ 53888622 (-) |
| prmt3 | prmt3 | coding | upstream | 736145 | 53899067 ~ 54007283 (-) |
| LOC110526925 | LOC106587060 | coding | upstream | 962575 | 54125497 ~ 54370901 (-) |
| LOC118965035 | NA | coding | upstream | 1174197 | 54337119 ~ 54346075 (-) |
| si:ch211-210p4.6 | LOC106587062 | coding | upstream | 1222833 | 54385755 ~ 54402116 (-) |
| G520519 | NA | non-coding | downstream | 44308 | 53097139 ~ 53097907 (-) |
| G520510 | NA | non-coding | downstream | 49922 | 53092001 ~ 53092293 (-) |
| G520122 | NA | non-coding | downstream | 474540 | 52667413 ~ 52667675 (-) |
| G519873 | LOC106587059 | non-coding | downstream | 584552 | 52277474 ~ 52557663 (-) |
| G519944 | LOC106587051 | non-coding | downstream | 751829 | 52388627 ~ 52390386 (-) |
| G520735 | NA | non-coding | upstream | 102623 | 53265545 ~ 53265848 (-) |
| G520761 | NA | non-coding | upstream | 124813 | 53287735 ~ 53287952 (-) |
| G520768 | NA | non-coding | upstream | 131517 | 53294439 ~ 53294705 (-) |
| G521207 | NA | non-coding | upstream | 248678 | 53411600 ~ 53466748 (-) |
| G521306 | NA | non-coding | upstream | 388666 | 53551588 ~ 53551793 (-) |
| LOC110526143 | LOC106587046 | other | downstream | 1529970 | 51563139 ~ 51643817 (-) |
| G517877 | NA | other | downstream | 2220117 | 50911814 ~ 50922098 (-) |
| G517777 | LOC106587028 | other | downstream | 2490796 | 50636549 ~ 50740638 (-) |
| LOC110515945 | LOC106585521 | other | downstream | 3518472 | 49622196 ~ 49624916 (-) |
| G516320 | LOC106585521 | other | downstream | 3605930 | 49535215 ~ 49536285 (-) |
| G521438 | NA | other | upstream | 588194 | 53751116 ~ 53751623 (-) |
| G521441 | NA | other | upstream | 591127 | 53754049 ~ 53754538 (-) |
| G521418 | NA | other | upstream | 597311 | 53760233 ~ 53761885 (-) |
| G521468 | NA | other | upstream | 648791 | 53811713 ~ 53812038 (-) |
| G524834 | NA | other | upstream | 2805418 | 55968340 ~ 55969672 (-) |
