Gene
RNA
| Item | Value |
|---|---|
| gene id | G520996 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 53596621 ~ 53596888 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU590738 | True | 268 | lncRNA | 0.38 | 1 | 53596621 | 53596888 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526152 | LOC106587056 | coding | upstream | 394222 | 53111140 ~ 53202399 (+) |
| LOC118965121 | NA | coding | upstream | 433418 | 53163095 ~ 53163203 (+) |
| LOC118965122 | NA | coding | upstream | 437606 | 53158911 ~ 53159015 (+) |
| LOC118965081 | NA | coding | upstream | 528878 | 53066027 ~ 53067743 (+) |
| mapk8ip1b | LOC106587053 | coding | upstream | 950976 | 52524356 ~ 52645645 (+) |
| LOC110526155 | LOC106587070 | coding | downstream | 423224 | 54020112 ~ 54035663 (+) |
| LOC110526157 | LOC106587066 | coding | downstream | 485857 | 54082745 ~ 54104736 (+) |
| brsk2b | LOC106587064 | coding | downstream | 855566 | 54452454 ~ 54639254 (+) |
| LOC110526161 | LOC106587065 | coding | downstream | 1196237 | 54793125 ~ 54954478 (+) |
| LOC118965082 | NA | coding | downstream | 1469312 | 55066200 ~ 55068243 (+) |
| G520992 | NA | non-coding | upstream | 2883 | 53593371 ~ 53593738 (+) |
| G520991 | NA | non-coding | upstream | 6518 | 53589901 ~ 53590103 (+) |
| G520990 | NA | non-coding | upstream | 7423 | 53588857 ~ 53589198 (+) |
| G520988 | NA | non-coding | upstream | 9939 | 53586477 ~ 53586682 (+) |
| G520976 | NA | non-coding | upstream | 22066 | 53574352 ~ 53574555 (+) |
| G521006 | NA | non-coding | downstream | 11932 | 53608820 ~ 53609033 (+) |
| G521010 | NA | non-coding | downstream | 16096 | 53612984 ~ 53613256 (+) |
| G521019 | NA | non-coding | downstream | 42891 | 53639779 ~ 53640058 (+) |
| G521024 | NA | non-coding | downstream | 50509 | 53647397 ~ 53647624 (+) |
| G521032 | NA | non-coding | downstream | 62127 | 53659015 ~ 53659283 (+) |
| G519603 | NA | other | upstream | 941324 | 52651940 ~ 52655297 (+) |
| LOC110493840 | LOC106605670 | other | upstream | 1317623 | 52277694 ~ 52279409 (+) |
| LOC110526128 | NA | other | upstream | 2674524 | 50911697 ~ 50922106 (+) |
| LOC118964907 | NA | other | upstream | 2861385 | 50719208 ~ 50743120 (+) |
| barhl1a | barhl1 | other | upstream | 3844872 | 49748788 ~ 49753260 (+) |
| G521552 | prmt3 | other | downstream | 329054 | 53925942 ~ 53955130 (+) |
| G521914 | NA | other | downstream | 673037 | 54269925 ~ 54270259 (+) |
| G523529 | NA | other | downstream | 1887361 | 55484249 ~ 55484607 (+) |
| LOC110526167 | LOC106587078 | other | downstream | 1966860 | 55563439 ~ 55568167 (+) |
