G521024


Basic Information

Item Value
gene id G521024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 53647397 ~ 53647624 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU590766
TGTCATTATTTACAGATTATTGGTGTGGggcagaaacagagagggagagaagagagaatgtcGAGAGTGATGGAGAGCAGTTGCTTCACAAGGTATCTCTAGGCCAACCTGAAAATACATGTACTTGTAAGtaattgatagttggtattcagcagtcagaAAAGTATGCCTTACTTACTTTGAAAAACTactgattttgtcagacagcataggcagcagctctaaaTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU590766 True 228 lncRNA 0.39 1 53647397 53647624

Neighbor

gene id symbol gene type direction distance location
LOC110526152 LOC106587056 coding upstream 444998 53111140 ~ 53202399 (+)
LOC118965121 NA coding upstream 484194 53163095 ~ 53163203 (+)
LOC118965122 NA coding upstream 488382 53158911 ~ 53159015 (+)
LOC118965081 NA coding upstream 579654 53066027 ~ 53067743 (+)
mapk8ip1b LOC106587053 coding upstream 1001752 52524356 ~ 52645645 (+)
LOC110526155 LOC106587070 coding downstream 372488 54020112 ~ 54035663 (+)
LOC110526157 LOC106587066 coding downstream 435121 54082745 ~ 54104736 (+)
brsk2b LOC106587064 coding downstream 804830 54452454 ~ 54639254 (+)
LOC110526161 LOC106587065 coding downstream 1145501 54793125 ~ 54954478 (+)
LOC118965082 NA coding downstream 1418576 55066200 ~ 55068243 (+)
G521019 NA non-coding upstream 7339 53639779 ~ 53640058 (+)
G521010 NA non-coding upstream 34141 53612984 ~ 53613256 (+)
G521006 NA non-coding upstream 38364 53608820 ~ 53609033 (+)
G520996 NA non-coding upstream 50509 53596621 ~ 53596888 (+)
G520992 NA non-coding upstream 53659 53593371 ~ 53593738 (+)
G521032 NA non-coding downstream 11391 53659015 ~ 53659283 (+)
G521035 NA non-coding downstream 13848 53661472 ~ 53661704 (+)
G521039 NA non-coding downstream 19216 53666840 ~ 53667084 (+)
G521044 NA non-coding downstream 24891 53672515 ~ 53672718 (+)
G521047 NA non-coding downstream 28553 53676177 ~ 53676412 (+)
G519603 NA other upstream 992100 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 1368399 52277694 ~ 52279409 (+)
LOC110526128 NA other upstream 2725300 50911697 ~ 50922106 (+)
LOC118964907 NA other upstream 2912161 50719208 ~ 50743120 (+)
barhl1a barhl1 other upstream 3895648 49748788 ~ 49753260 (+)
G521552 prmt3 other downstream 278318 53925942 ~ 53955130 (+)
G521914 NA other downstream 622301 54269925 ~ 54270259 (+)
G523529 NA other downstream 1836625 55484249 ~ 55484607 (+)
LOC110526167 LOC106587078 other downstream 1916124 55563439 ~ 55568167 (+)

Expression


Co-expression Network