Gene
RNA
| Item | Value |
|---|---|
| gene id | G521054 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 53681052 ~ 53681313 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106530015 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU590796 | True | 262 | lncRNA | 0.36 | 1 | 53681052 | 53681313 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526152 | LOC106587056 | coding | upstream | 478653 | 53111140 ~ 53202399 (+) |
| LOC118965121 | NA | coding | upstream | 517849 | 53163095 ~ 53163203 (+) |
| LOC118965122 | NA | coding | upstream | 522037 | 53158911 ~ 53159015 (+) |
| LOC118965081 | NA | coding | upstream | 613309 | 53066027 ~ 53067743 (+) |
| mapk8ip1b | LOC106587053 | coding | upstream | 1035407 | 52524356 ~ 52645645 (+) |
| LOC110526155 | LOC106587070 | coding | downstream | 338799 | 54020112 ~ 54035663 (+) |
| LOC110526157 | LOC106587066 | coding | downstream | 401432 | 54082745 ~ 54104736 (+) |
| brsk2b | LOC106587064 | coding | downstream | 771141 | 54452454 ~ 54639254 (+) |
| LOC110526161 | LOC106587065 | coding | downstream | 1111812 | 54793125 ~ 54954478 (+) |
| LOC118965082 | NA | coding | downstream | 1384887 | 55066200 ~ 55068243 (+) |
| G521051 | NA | non-coding | upstream | 2574 | 53678197 ~ 53678478 (+) |
| G521047 | NA | non-coding | upstream | 4640 | 53676177 ~ 53676412 (+) |
| G521044 | NA | non-coding | upstream | 8334 | 53672515 ~ 53672718 (+) |
| G521039 | NA | non-coding | upstream | 13968 | 53666840 ~ 53667084 (+) |
| G521035 | NA | non-coding | upstream | 19348 | 53661472 ~ 53661704 (+) |
| G521060 | NA | non-coding | downstream | 9671 | 53690984 ~ 53691232 (+) |
| G521074 | NA | non-coding | downstream | 27471 | 53708784 ~ 53709001 (+) |
| G521075 | NA | non-coding | downstream | 28011 | 53709324 ~ 53709554 (+) |
| G521104 | NA | non-coding | downstream | 71180 | 53752493 ~ 53752735 (+) |
| G520808 | NA | non-coding | downstream | 88005 | 53769318 ~ 53769575 (+) |
| G519603 | NA | other | upstream | 1025755 | 52651940 ~ 52655297 (+) |
| LOC110493840 | LOC106605670 | other | upstream | 1402054 | 52277694 ~ 52279409 (+) |
| LOC110526128 | NA | other | upstream | 2758955 | 50911697 ~ 50922106 (+) |
| LOC118964907 | NA | other | upstream | 2945816 | 50719208 ~ 50743120 (+) |
| barhl1a | barhl1 | other | upstream | 3929303 | 49748788 ~ 49753260 (+) |
| G521552 | prmt3 | other | downstream | 244629 | 53925942 ~ 53955130 (+) |
| G521914 | NA | other | downstream | 588612 | 54269925 ~ 54270259 (+) |
| G523529 | NA | other | downstream | 1802936 | 55484249 ~ 55484607 (+) |
| LOC110526167 | LOC106587078 | other | downstream | 1882435 | 55563439 ~ 55568167 (+) |
