Gene
RNA
| Item | Value |
|---|---|
| gene id | G521418 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 53760233 ~ 53761885 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU591178 | True | 1653 | TUCP | 0.42 | 1 | 53760233 | 53761885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lrp4 | LOC106587054 | coding | downstream | 868140 | 52673661 ~ 52892093 (-) |
| LOC110526151 | LOC106609580 | coding | downstream | 1014645 | 52744519 ~ 52745588 (-) |
| LOC118965080 | NA | coding | downstream | 1376903 | 52363668 ~ 52383330 (-) |
| tent2 | papd4 | coding | downstream | 1916892 | 51800346 ~ 51843341 (-) |
| cmya5 | cmya5 | coding | downstream | 1962586 | 51718652 ~ 51797647 (-) |
| LOC110526924 | LOC106587063 | coding | upstream | 66896 | 53828781 ~ 53888622 (-) |
| prmt3 | prmt3 | coding | upstream | 137182 | 53899067 ~ 54007283 (-) |
| LOC110526925 | LOC106587060 | coding | upstream | 363612 | 54125497 ~ 54370901 (-) |
| LOC118965035 | NA | coding | upstream | 575234 | 54337119 ~ 54346075 (-) |
| si:ch211-210p4.6 | LOC106587062 | coding | upstream | 623870 | 54385755 ~ 54402116 (-) |
| G521419 | NA | non-coding | downstream | 141 | 53758835 ~ 53760092 (-) |
| G521444 | NA | non-coding | downstream | 4134 | 53755892 ~ 53756099 (-) |
| G521439 | NA | non-coding | downstream | 7763 | 53752225 ~ 53752470 (-) |
| G521438 | NA | non-coding | downstream | 8610 | 53751116 ~ 53751623 (-) |
| G521433 | NA | non-coding | downstream | 15428 | 53744534 ~ 53744805 (-) |
| G521416 | NA | non-coding | upstream | 127 | 53762012 ~ 53766605 (-) |
| G521415 | NA | non-coding | upstream | 7430 | 53769315 ~ 53769624 (-) |
| G521417 | NA | non-coding | upstream | 11378 | 53773263 ~ 53775544 (-) |
| G521622 | NA | non-coding | upstream | 60124 | 53822009 ~ 53823834 (-) |
| G521672 | NA | non-coding | upstream | 247324 | 54009209 ~ 54010175 (-) |
| G521441 | NA | other | downstream | 5695 | 53754049 ~ 53754538 (-) |
| G520661 | LOC106587056 | other | downstream | 597311 | 53142215 ~ 53162922 (-) |
| LOC110526143 | LOC106587046 | other | downstream | 2147988 | 51563139 ~ 51643817 (-) |
| G517877 | NA | other | downstream | 2838135 | 50911814 ~ 50922098 (-) |
| G521468 | NA | other | upstream | 49828 | 53811713 ~ 53812038 (-) |
| G524834 | NA | other | upstream | 2206455 | 55968340 ~ 55969672 (-) |
| G525008 | LOC106561927 | other | upstream | 2405546 | 56167431 ~ 56302651 (-) |
| LOC110526187 | LOC106587097 | other | upstream | 3145689 | 56893209 ~ 56947117 (-) |
| G526016 | NA | other | upstream | 3385013 | 57146898 ~ 57147224 (-) |
