G521764


Basic Information

Item Value
gene id G521764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 54042525 ~ 54042737 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU591544
AAATACAGCCAAATAACATCATACCATCCAATTTTCTTAAAATACAGTGCTATGATATGTTGGCCATTATCGCACAGCACTACTCACAAGTCACTACCATCAGCTGTGACTTGGTTAATATGGTTGGAGTAGTTTGAAGTTACTCTCTCGTGGATACCTAATCCATCATCTTTTTCCAAAACAAAAACCGTTTTCAAGCAGGGAATGTGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU591544 True 213 lncRNA 0.38 1 54042525 54042737

Neighbor

gene id symbol gene type direction distance location
LOC110526155 LOC106587070 coding upstream 6862 54020112 ~ 54035663 (+)
LOC110526153 LOC106587057 coding upstream 282929 53354778 ~ 53759596 (+)
LOC110526152 LOC106587056 coding upstream 840126 53111140 ~ 53202399 (+)
LOC118965121 NA coding upstream 879322 53163095 ~ 53163203 (+)
LOC118965122 NA coding upstream 883510 53158911 ~ 53159015 (+)
LOC110526157 LOC106587066 coding downstream 40008 54082745 ~ 54104736 (+)
brsk2b LOC106587064 coding downstream 409717 54452454 ~ 54639254 (+)
LOC110526161 LOC106587065 coding downstream 750388 54793125 ~ 54954478 (+)
LOC118965082 NA coding downstream 1023463 55066200 ~ 55068243 (+)
LOC110526162 NA coding downstream 1084319 55127056 ~ 55135622 (+)
G521609 NA non-coding upstream 32180 54009215 ~ 54010345 (+)
G521608 NA non-coding upstream 33464 54007623 ~ 54009061 (+)
G520810 NA non-coding upstream 267001 53774086 ~ 53775524 (+)
G520808 NA non-coding upstream 272950 53769318 ~ 53769575 (+)
G521788 NA non-coding downstream 8534 54051271 ~ 54051519 (+)
G521903 NA non-coding downstream 214887 54257624 ~ 54257903 (+)
G521913 NA non-coding downstream 226889 54269626 ~ 54269868 (+)
G522133 NA non-coding downstream 280787 54323524 ~ 54328396 (+)
G522263 NA non-coding downstream 390350 54433087 ~ 54433300 (+)
G521552 prmt3 other upstream 87395 53925942 ~ 53955130 (+)
G519603 NA other upstream 1387228 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 1763527 52277694 ~ 52279409 (+)
LOC110526128 NA other upstream 3120428 50911697 ~ 50922106 (+)
LOC118964907 NA other upstream 3307289 50719208 ~ 50743120 (+)
G521914 NA other downstream 227188 54269925 ~ 54270259 (+)
G523529 NA other downstream 1441512 55484249 ~ 55484607 (+)
LOC110526167 LOC106587078 other downstream 1521011 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 other downstream 1871606 55904064 ~ 55916081 (+)

Expression


Co-expression Network