G521913


Basic Information

Item Value
gene id G521913
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 54269626 ~ 54269868 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU591699
ctacagctgaggtgggagactctgtccataggacaacaatcagtcatatattgcacaaatctggcctttatggaagagtggcaagaaagccatttcttaaagatatccataaaatgtgtcgtttaaagtttgccacaagcgacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU591699 True 243 lncRNA 0.41 1 54269626 54269868

Neighbor

gene id symbol gene type direction distance location
LOC110526157 LOC106587066 coding upstream 164890 54082745 ~ 54104736 (+)
LOC110526155 LOC106587070 coding upstream 233963 54020112 ~ 54035663 (+)
LOC110526153 LOC106587057 coding upstream 510030 53354778 ~ 53759596 (+)
LOC118965121 NA coding upstream 1106423 53163095 ~ 53163203 (+)
LOC118965122 NA coding upstream 1110611 53158911 ~ 53159015 (+)
brsk2b LOC106587064 coding downstream 182586 54452454 ~ 54639254 (+)
LOC110526161 LOC106587065 coding downstream 523257 54793125 ~ 54954478 (+)
LOC118965082 NA coding downstream 796332 55066200 ~ 55068243 (+)
LOC110526162 NA coding downstream 857188 55127056 ~ 55135622 (+)
LOC110526930 LOC106561912 coding downstream 1081861 55351729 ~ 55364742 (+)
G521903 NA non-coding upstream 11723 54257624 ~ 54257903 (+)
G521788 NA non-coding upstream 218107 54051271 ~ 54051519 (+)
G521764 NA non-coding upstream 226889 54042525 ~ 54042737 (+)
G521609 NA non-coding upstream 259281 54009215 ~ 54010345 (+)
G522133 NA non-coding downstream 53656 54323524 ~ 54328396 (+)
G522263 NA non-coding downstream 163219 54433087 ~ 54433300 (+)
G522268 NA non-coding downstream 164864 54434732 ~ 54434931 (+)
G522387 LOC106587068 non-coding downstream 400571 54670439 ~ 54674861 (+)
G521552 prmt3 other upstream 314496 53925942 ~ 53955130 (+)
G519603 NA other upstream 1614329 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 1990628 52277694 ~ 52279409 (+)
LOC110526128 NA other upstream 3347529 50911697 ~ 50922106 (+)
LOC118964907 NA other upstream 3534390 50719208 ~ 50743120 (+)
G521914 NA other downstream 57 54269925 ~ 54270259 (+)
G523529 NA other downstream 1214381 55484249 ~ 55484607 (+)
LOC110526167 LOC106587078 other downstream 1293880 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 other downstream 1644475 55904064 ~ 55916081 (+)

Expression


Co-expression Network