G522133


Basic Information

Item Value
gene id G522133
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 54323524 ~ 54328396 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU591931
taagtgttacggtgcgtgaatgaggacccaaaagcgaatcaacttaaacagagcttctttaattaccaaacataggtaggctcagatggaccggcagattccgacaggacaggacaaggttacagcaaacatgacggcagtctggttcaggcatgaatgacacaaacaaacaagaatccgacaaggacaggagcagaaacagagagagatattggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU591931 True 216 lncRNA 0.46 2 54323524 54328396

Neighbor

gene id symbol gene type direction distance location
LOC110526157 LOC106587066 coding upstream 218788 54082745 ~ 54104736 (+)
LOC110526155 LOC106587070 coding upstream 287861 54020112 ~ 54035663 (+)
LOC110526153 LOC106587057 coding upstream 563928 53354778 ~ 53759596 (+)
LOC118965121 NA coding upstream 1160321 53163095 ~ 53163203 (+)
LOC118965122 NA coding upstream 1164509 53158911 ~ 53159015 (+)
brsk2b LOC106587064 coding downstream 124058 54452454 ~ 54639254 (+)
LOC110526161 LOC106587065 coding downstream 464729 54793125 ~ 54954478 (+)
LOC118965082 NA coding downstream 737804 55066200 ~ 55068243 (+)
LOC110526162 NA coding downstream 798660 55127056 ~ 55135622 (+)
LOC110526930 LOC106561912 coding downstream 1023333 55351729 ~ 55364742 (+)
G521913 NA non-coding upstream 53656 54269626 ~ 54269868 (+)
G521903 NA non-coding upstream 65621 54257624 ~ 54257903 (+)
G521788 NA non-coding upstream 272005 54051271 ~ 54051519 (+)
G521764 NA non-coding upstream 280787 54042525 ~ 54042737 (+)
G522263 NA non-coding downstream 104691 54433087 ~ 54433300 (+)
G522268 NA non-coding downstream 106336 54434732 ~ 54434931 (+)
G522387 LOC106587068 non-coding downstream 342043 54670439 ~ 54674861 (+)
G522430 NA non-coding downstream 347498 54675894 ~ 54679030 (+)
G521914 NA other upstream 53265 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 368394 53925942 ~ 53955130 (+)
G519603 NA other upstream 1668227 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 2044526 52277694 ~ 52279409 (+)
LOC110526128 NA other upstream 3401427 50911697 ~ 50922106 (+)
G523529 NA other downstream 1155853 55484249 ~ 55484607 (+)
LOC110526167 LOC106587078 other downstream 1235352 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 other downstream 1585947 55904064 ~ 55916081 (+)
LOC110526175 LOC106587084 other downstream 1781883 56020625 ~ 56120747 (+)

Expression


Co-expression Network