Gene
RNA
| Item | Value |
|---|---|
| gene id | G522676 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 54452479 ~ 54452928 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/threonine-protein kinase BRSK2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU592500 | True | 450 | lncRNA | 0.47 | 1 | 54452479 | 54452928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526926 | rassf7 | coding | downstream | 27844 | 54410210 ~ 54424635 (-) |
| si:ch211-210p4.6 | LOC106587062 | coding | downstream | 50363 | 54385755 ~ 54402116 (-) |
| LOC110526925 | LOC106587060 | coding | downstream | 81578 | 54125497 ~ 54370901 (-) |
| LOC118965035 | NA | coding | downstream | 106404 | 54337119 ~ 54346075 (-) |
| prmt3 | prmt3 | coding | downstream | 445196 | 53899067 ~ 54007283 (-) |
| LOC110526159 | LOC106587061 | coding | upstream | 186401 | 54639329 ~ 54669756 (-) |
| si:ch211-288d18.1 | LOC106587068 | coding | upstream | 220586 | 54673514 ~ 54712464 (-) |
| LOC118964910 | NA | coding | upstream | 625384 | 55078312 ~ 55111415 (-) |
| LOC110526929 | NA | coding | upstream | 703360 | 55156288 ~ 55172862 (-) |
| LOC110526164 | LOC106561915 | coding | upstream | 996179 | 55449107 ~ 55458630 (-) |
| G522281 | NA | non-coding | downstream | 10399 | 54441872 ~ 54442080 (-) |
| G522258 | NA | non-coding | downstream | 26303 | 54425969 ~ 54426176 (-) |
| G522174 | NA | non-coding | downstream | 94628 | 54357625 ~ 54357851 (-) |
| G522170 | NA | non-coding | downstream | 97489 | 54354731 ~ 54354990 (-) |
| G522137 | NA | non-coding | downstream | 121736 | 54330194 ~ 54330743 (-) |
| G522748 | NA | non-coding | upstream | 114054 | 54566982 ~ 54628699 (-) |
| G522746 | LOC106587064 | non-coding | upstream | 179080 | 54632008 ~ 54656140 (-) |
| G522856 | NA | non-coding | upstream | 297446 | 54750374 ~ 54750629 (-) |
| G522857 | NA | non-coding | upstream | 300507 | 54753435 ~ 54753656 (-) |
| G522871 | NA | non-coding | upstream | 327910 | 54780838 ~ 54781049 (-) |
| G521468 | NA | other | downstream | 640441 | 53811713 ~ 53812038 (-) |
| G521418 | NA | other | downstream | 690594 | 53760233 ~ 53761885 (-) |
| G521441 | NA | other | downstream | 697941 | 53754049 ~ 53754538 (-) |
| G521438 | NA | other | downstream | 700856 | 53751116 ~ 53751623 (-) |
| G520661 | LOC106587056 | other | downstream | 1289557 | 53142215 ~ 53162922 (-) |
| G524834 | NA | other | upstream | 1515412 | 55968340 ~ 55969672 (-) |
| G525008 | LOC106561927 | other | upstream | 1714503 | 56167431 ~ 56302651 (-) |
| LOC110526187 | LOC106587097 | other | upstream | 2454646 | 56893209 ~ 56947117 (-) |
| G526016 | NA | other | upstream | 2693970 | 57146898 ~ 57147224 (-) |
| ccnd1 | LOC106587137 | other | upstream | 3502480 | 57955388 ~ 57962808 (-) |
