G522503


Basic Information

Item Value
gene id G522503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 54780753 ~ 54781190 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU592321
tcccaaacactcactggacccatatttactttcaatctcttttcgatttttattttgtttataccttccggtaacctgcctcacccaatgtgatacggaatcgctactatttttaatttttagaacacactcaagaacctccagaagctaaccagctaactagctacaagctattcagtcattgttagccactgctagcggcttttaccttttaccttctgcacagccagacagttttttaacctggataatactcgccagtccagcttccctgccccatccaccgctgccccctggacactgatcacttggctacatagctgatgcatgctggactgtccattaatcacggtactccattctgcttgtttatgttttatctgtcggccccagccgcactcaggctctgtgtgtagttaatccgaccctccctgccta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU592321 True 438 lncRNA 0.46 1 54780753 54781190

Neighbor

gene id symbol gene type direction distance location
brsk2b LOC106587064 coding upstream 141499 54452454 ~ 54639254 (+)
LOC110526157 LOC106587066 coding upstream 676017 54082745 ~ 54104736 (+)
LOC110526155 LOC106587070 coding upstream 745090 54020112 ~ 54035663 (+)
LOC110526153 LOC106587057 coding upstream 1021157 53354778 ~ 53759596 (+)
LOC118965121 NA coding upstream 1617550 53163095 ~ 53163203 (+)
LOC110526161 LOC106587065 coding downstream 11935 54793125 ~ 54954478 (+)
LOC118965082 NA coding downstream 285010 55066200 ~ 55068243 (+)
LOC110526162 NA coding downstream 345866 55127056 ~ 55135622 (+)
LOC110526930 LOC106561912 coding downstream 570539 55351729 ~ 55364742 (+)
LOC110526163 LOC106587071 coding downstream 593906 55375096 ~ 55448136 (+)
G522480 NA non-coding upstream 1181 54778993 ~ 54779572 (+)
G522492 NA non-coding upstream 18154 54762388 ~ 54762599 (+)
G522451 NA non-coding upstream 30965 54749305 ~ 54749788 (+)
G522430 NA non-coding upstream 101723 54675894 ~ 54679030 (+)
G522387 LOC106587068 non-coding upstream 105892 54670439 ~ 54674861 (+)
G522506 NA non-coding downstream 3352 54784542 ~ 54784784 (+)
G522510 NA non-coding downstream 8319 54789509 ~ 54789736 (+)
G523053 NA non-coding downstream 240207 55021397 ~ 55021641 (+)
G523060 NA non-coding downstream 246469 55027659 ~ 55027916 (+)
G523090 NA non-coding downstream 266151 55047341 ~ 55047561 (+)
G521914 NA other upstream 510494 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 825623 53925942 ~ 53955130 (+)
G519603 NA other upstream 2125456 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 2501755 52277694 ~ 52279409 (+)
LOC110526128 NA other upstream 3858656 50911697 ~ 50922106 (+)
G523529 NA other downstream 703059 55484249 ~ 55484607 (+)
LOC110526167 LOC106587078 other downstream 782558 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 other downstream 1133153 55904064 ~ 55916081 (+)
LOC110526175 LOC106587084 other downstream 1329089 56020625 ~ 56120747 (+)

Expression


Co-expression Network