G523053


Basic Information

Item Value
gene id G523053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55021397 ~ 55021641 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU592893
atAAAGGAGGTATTTgcacataaattatggactttatcgaacaaaacaaacatttattgtggaactgggattcctgggagtgcattctgatgaagatcatcaaaggtaagtgaaaatttacaatgctatttctgaccTTTTGACGCCACAACATGGCTTGTTTtggtgtctgagcgctgtactcagattattgcatggtgtgctttttccttAAAGCTTTTTtttaatctgacacagcggttgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU592893 True 245 lncRNA 0.38 1 55021397 55021641

Neighbor

gene id symbol gene type direction distance location
LOC110526161 LOC106587065 coding upstream 66919 54793125 ~ 54954478 (+)
brsk2b LOC106587064 coding upstream 382143 54452454 ~ 54639254 (+)
LOC110526157 LOC106587066 coding upstream 916661 54082745 ~ 54104736 (+)
LOC110526155 LOC106587070 coding upstream 985734 54020112 ~ 54035663 (+)
LOC110526153 LOC106587057 coding upstream 1261801 53354778 ~ 53759596 (+)
LOC118965082 NA coding downstream 44559 55066200 ~ 55068243 (+)
LOC110526162 NA coding downstream 105415 55127056 ~ 55135622 (+)
LOC110526930 LOC106561912 coding downstream 330088 55351729 ~ 55364742 (+)
LOC110526163 LOC106587071 coding downstream 353455 55375096 ~ 55448136 (+)
LOC110526167 LOC106587078 coding downstream 541798 55563439 ~ 55568167 (+)
G522510 NA non-coding upstream 231661 54789509 ~ 54789736 (+)
G522506 NA non-coding upstream 236613 54784542 ~ 54784784 (+)
G522503 NA non-coding upstream 240207 54780753 ~ 54781190 (+)
G522480 NA non-coding upstream 241825 54778993 ~ 54779572 (+)
G522492 NA non-coding upstream 258798 54762388 ~ 54762599 (+)
G523060 NA non-coding downstream 6018 55027659 ~ 55027916 (+)
G523090 NA non-coding downstream 25700 55047341 ~ 55047561 (+)
G523091 NA non-coding downstream 26978 55048619 ~ 55048934 (+)
G523122 NA non-coding downstream 49018 55070659 ~ 55071002 (+)
G521914 NA other upstream 751138 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1066267 53925942 ~ 53955130 (+)
G519603 NA other upstream 2366100 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 2742399 52277694 ~ 52279409 (+)
G523529 NA other downstream 462608 55484249 ~ 55484607 (+)
LOC110526169 LOC106587076 other downstream 892702 55904064 ~ 55916081 (+)
LOC110526175 LOC106587084 other downstream 1088638 56020625 ~ 56120747 (+)
G525645 NA other downstream 2554443 57576084 ~ 57581070 (+)

Expression


Co-expression Network