G523060


Basic Information

Item Value
gene id G523060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55027659 ~ 55027916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU592900
gtcctggacttcctgacgggctgcccacgggtggtgagggtaggaaacaacatctccctcCACTGATCctgaacactggggccccacaagggtgcgttctcagccctctcctgtactccctgttcacccatgacttcgtggcaatgcacgcctccaactcaatcatcaagattGCAGACGACgttacagtggtaggcttgattaccaacaacgatgagacagcctacagggaggaggtgagggccctcggagtgttgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU592900 True 258 lncRNA 0.57 1 55027659 55027916

Neighbor

gene id symbol gene type direction distance location
LOC110526161 LOC106587065 coding upstream 73181 54793125 ~ 54954478 (+)
brsk2b LOC106587064 coding upstream 388405 54452454 ~ 54639254 (+)
LOC110526157 LOC106587066 coding upstream 922923 54082745 ~ 54104736 (+)
LOC110526155 LOC106587070 coding upstream 991996 54020112 ~ 54035663 (+)
LOC110526153 LOC106587057 coding upstream 1268063 53354778 ~ 53759596 (+)
LOC118965082 NA coding downstream 38284 55066200 ~ 55068243 (+)
LOC110526162 NA coding downstream 99140 55127056 ~ 55135622 (+)
LOC110526930 LOC106561912 coding downstream 323813 55351729 ~ 55364742 (+)
LOC110526163 LOC106587071 coding downstream 347180 55375096 ~ 55448136 (+)
LOC110526167 LOC106587078 coding downstream 535523 55563439 ~ 55568167 (+)
G523053 NA non-coding upstream 6018 55021397 ~ 55021641 (+)
G522510 NA non-coding upstream 237923 54789509 ~ 54789736 (+)
G522506 NA non-coding upstream 242875 54784542 ~ 54784784 (+)
G522503 NA non-coding upstream 246469 54780753 ~ 54781190 (+)
G522480 NA non-coding upstream 248087 54778993 ~ 54779572 (+)
G523090 NA non-coding downstream 19425 55047341 ~ 55047561 (+)
G523091 NA non-coding downstream 20703 55048619 ~ 55048934 (+)
G523122 NA non-coding downstream 42743 55070659 ~ 55071002 (+)
G523235 NA non-coding downstream 224033 55251949 ~ 55257369 (+)
G521914 NA other upstream 757400 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1072529 53925942 ~ 53955130 (+)
G519603 NA other upstream 2372362 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 2748661 52277694 ~ 52279409 (+)
G523529 NA other downstream 456333 55484249 ~ 55484607 (+)
LOC110526169 LOC106587076 other downstream 886427 55904064 ~ 55916081 (+)
LOC110526175 LOC106587084 other downstream 1082363 56020625 ~ 56120747 (+)
G525645 NA other downstream 2548168 57576084 ~ 57581070 (+)

Expression


Co-expression Network