G523122


Basic Information

Item Value
gene id G523122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55070659 ~ 55071002 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU592962
acgcgaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatatctcttcattgatacatcgttcttggacacatcgtttctcccctatatcaaatggaaaagtacgagcagctggcaattgcgcaccgaattccacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacagaaagtgtaggctcattccttgcgcaatcacagccatataaggagacaatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU592962 True 344 lncRNA 0.42 1 55070659 55071002

Neighbor

gene id symbol gene type direction distance location
LOC118965082 NA coding upstream 2416 55066200 ~ 55068243 (+)
LOC110526161 LOC106587065 coding upstream 116181 54793125 ~ 54954478 (+)
brsk2b LOC106587064 coding upstream 431405 54452454 ~ 54639254 (+)
LOC110526157 LOC106587066 coding upstream 965923 54082745 ~ 54104736 (+)
LOC110526155 LOC106587070 coding upstream 1034996 54020112 ~ 54035663 (+)
LOC110526162 NA coding downstream 56054 55127056 ~ 55135622 (+)
LOC110526930 LOC106561912 coding downstream 280727 55351729 ~ 55364742 (+)
LOC110526163 LOC106587071 coding downstream 304094 55375096 ~ 55448136 (+)
LOC110526167 LOC106587078 coding downstream 492437 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 coding downstream 833062 55904064 ~ 55916081 (+)
G523091 NA non-coding upstream 21725 55048619 ~ 55048934 (+)
G523090 NA non-coding upstream 23098 55047341 ~ 55047561 (+)
G523060 NA non-coding upstream 42743 55027659 ~ 55027916 (+)
G523053 NA non-coding upstream 49018 55021397 ~ 55021641 (+)
G522510 NA non-coding upstream 280923 54789509 ~ 54789736 (+)
G523235 NA non-coding downstream 180947 55251949 ~ 55257369 (+)
G523403 NA non-coding downstream 233239 55304241 ~ 55333015 (+)
G523464 NA non-coding downstream 272235 55343237 ~ 55343462 (+)
G523490 NA non-coding downstream 330330 55401332 ~ 55454861 (+)
G521914 NA other upstream 800400 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1115529 53925942 ~ 53955130 (+)
G519603 NA other upstream 2415362 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 2791661 52277694 ~ 52279409 (+)
G523529 NA other downstream 413247 55484249 ~ 55484607 (+)
LOC110526175 LOC106587084 other downstream 1039277 56020625 ~ 56120747 (+)
G525645 NA other downstream 2505082 57576084 ~ 57581070 (+)

Expression


Co-expression Network