G523508


Basic Information

Item Value
gene id G523508
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55431793 ~ 55432133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593379
aaagtagatcaagacattctctatggaagacatgaacggtaaaataacaaaggaacccctttcaagttcagccgcaagttattacaggaattataacgTGTTGACTATTTCGCTCtaaaccatatacctttgactaatccggaaactatcacctcgaaaacaaaacgtttattccgttctgtattttatctaaagggtggcatccatgagtctaaatattcctgttatattgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593379 True 235 lncRNA 0.36 2 55431793 55432133

Neighbor

gene id symbol gene type direction distance location
LOC110526930 LOC106561912 coding upstream 67051 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 296171 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 363550 55066200 ~ 55068243 (+)
LOC110526161 LOC106587065 coding upstream 477315 54793125 ~ 54954478 (+)
brsk2b LOC106587064 coding upstream 792539 54452454 ~ 54639254 (+)
LOC110526167 LOC106587078 coding downstream 131306 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 coding downstream 471931 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 533089 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 539307 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 550137 55982270 ~ 55990919 (+)
G523464 NA non-coding upstream 88331 55343237 ~ 55343462 (+)
G523403 NA non-coding upstream 98778 55304241 ~ 55333015 (+)
G523235 NA non-coding upstream 174424 55251949 ~ 55257369 (+)
G523122 NA non-coding upstream 360791 55070659 ~ 55071002 (+)
G523520 NA non-coding downstream 39622 55471755 ~ 55472673 (+)
G523549 NA non-coding downstream 74147 55506280 ~ 55506566 (+)
G523553 NA non-coding downstream 78832 55510965 ~ 55511275 (+)
G523660 NA non-coding downstream 81083 55513216 ~ 55513437 (+)
G523689 NA non-coding downstream 103649 55535782 ~ 55536838 (+)
G521914 NA other upstream 1161534 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1476663 53925942 ~ 53955130 (+)
G519603 NA other upstream 2776496 52651940 ~ 52655297 (+)
LOC110493840 LOC106605670 other upstream 3152795 52277694 ~ 52279409 (+)
G523529 NA other downstream 52116 55484249 ~ 55484607 (+)
LOC110526175 LOC106587084 other downstream 678146 56020625 ~ 56120747 (+)
G525645 NA other downstream 2143951 57576084 ~ 57581070 (+)

Expression


Co-expression Network