G523549


Basic Information

Item Value
gene id G523549
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55506280 ~ 55506566 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593427
ctataaaatcctttctccgtaattaatattacctgattgagctaatcgtgtaaatgtaattaactagaaagttggGGTACCACGAAAgagtgtttatagagctgttatcttccgaataaactctggaagacctagtaatattttacatcaatagcagtcaatattaatcgtcaccttatttcagtctcatctgaaaattgtaaattcttggttatcttcacaaaccctggctaacaagttgaatcagcaatacaaaattgggtttaattatttatttactaaatatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593427 True 287 lncRNA 0.31 1 55506280 55506566

Neighbor

gene id symbol gene type direction distance location
LOC110526163 LOC106587071 coding upstream 58144 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 141538 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 370658 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 438037 55066200 ~ 55068243 (+)
LOC110526161 LOC106587065 coding upstream 551802 54793125 ~ 54954478 (+)
LOC110526167 LOC106587078 coding downstream 56873 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 coding downstream 397498 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 458656 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 464874 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 475704 55982270 ~ 55990919 (+)
G523520 NA non-coding upstream 33607 55471755 ~ 55472673 (+)
G523490 NA non-coding upstream 51419 55401332 ~ 55454861 (+)
G523508 NA non-coding upstream 74147 55431793 ~ 55432133 (+)
G523464 NA non-coding upstream 162818 55343237 ~ 55343462 (+)
G523403 NA non-coding upstream 173265 55304241 ~ 55333015 (+)
G523553 NA non-coding downstream 4399 55510965 ~ 55511275 (+)
G523660 NA non-coding downstream 6650 55513216 ~ 55513437 (+)
G523689 NA non-coding downstream 29216 55535782 ~ 55536838 (+)
G523696 NA non-coding downstream 36834 55543400 ~ 55543667 (+)
G523700 NA non-coding downstream 40011 55546577 ~ 55546965 (+)
G523529 NA other upstream 21673 55484249 ~ 55484607 (+)
G521914 NA other upstream 1236021 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1551150 53925942 ~ 53955130 (+)
G519603 NA other upstream 2850983 52651940 ~ 52655297 (+)
LOC110526175 LOC106587084 other downstream 603713 56020625 ~ 56120747 (+)
G525645 NA other downstream 2069518 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 2097542 57604108 ~ 57606367 (+)

Expression


Co-expression Network