G523660



Basic Information


Item Value
gene id G523660
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55513216 ~ 55513437 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU593549
GTCTTgatttgccaagtcaaccagcgtttctcctagctcctattttttccccagtctctattttttcctagccctcctggttttgacccttgcctgtcctgatcccgtatccacctgcctgaccactctgcctgttctgacctcgagcctgcctatccccttgtactgtttggactctgacctggtttatgaactctcgcctgtccccgacctgccttttgc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU593549 True 222 lncRNA 0.52 1 55513216 55513437
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110526163 LOC106587071 coding upstream 65080 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 148474 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 377594 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 444973 55066200 ~ 55068243 (+)
LOC110526161 LOC106587065 coding upstream 558738 54793125 ~ 54954478 (+)
LOC110526167 LOC106587078 coding downstream 50002 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 coding downstream 390627 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 451785 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 458003 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 468833 55982270 ~ 55990919 (+)
G523553 NA non-coding upstream 1941 55510965 ~ 55511275 (+)
G523549 NA non-coding upstream 6650 55506280 ~ 55506566 (+)
G523520 NA non-coding upstream 40543 55471755 ~ 55472673 (+)
G523490 NA non-coding upstream 58355 55401332 ~ 55454861 (+)
G523508 NA non-coding upstream 81083 55431793 ~ 55432133 (+)
G523689 NA non-coding downstream 22345 55535782 ~ 55536838 (+)
G523696 NA non-coding downstream 29963 55543400 ~ 55543667 (+)
G523700 NA non-coding downstream 33140 55546577 ~ 55546965 (+)
G523709 NA non-coding downstream 39432 55552869 ~ 55553110 (+)
G523719 NA non-coding downstream 45732 55559169 ~ 55559485 (+)
G523529 NA other upstream 28609 55484249 ~ 55484607 (+)
G521914 NA other upstream 1242957 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1558086 53925942 ~ 53955130 (+)
G519603 NA other upstream 2857919 52651940 ~ 52655297 (+)
LOC110526175 LOC106587084 other downstream 596842 56020625 ~ 56120747 (+)
G525645 NA other downstream 2062647 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 2090671 57604108 ~ 57606367 (+)

Expression


G523660 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G523660 Expression in each Bioproject

Bar chart with 18 bars.
G523660 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network