G523709


Basic Information

Item Value
gene id G523709
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55552869 ~ 55553110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593598
ATATTGTCATATTGTCATATCAGTAGGctacttgttgcatttacaacttgcCTAAGTCCTAccatcaactgatttcagccagtgtaTGGCTGTGTATTGACTGaattgtttgaatggaatgttggcatattggcagttaataaaaataaaatgtgatcattttaaaactgtctggctagctagctaacaaacatacagtgcagatcaattcttcaaattcattattttacacacACTATCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593598 True 242 lncRNA 0.33 1 55552869 55553110

Neighbor

gene id symbol gene type direction distance location
LOC110526163 LOC106587071 coding upstream 104733 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 188127 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 417247 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 484626 55066200 ~ 55068243 (+)
LOC110526161 LOC106587065 coding upstream 598391 54793125 ~ 54954478 (+)
LOC110526167 LOC106587078 coding downstream 10329 55563439 ~ 55568167 (+)
LOC110526169 LOC106587076 coding downstream 350954 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 412112 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 418330 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 429160 55982270 ~ 55990919 (+)
G523700 NA non-coding upstream 5904 55546577 ~ 55546965 (+)
G523696 NA non-coding upstream 9202 55543400 ~ 55543667 (+)
G523689 NA non-coding upstream 16031 55535782 ~ 55536838 (+)
G523660 NA non-coding upstream 39432 55513216 ~ 55513437 (+)
G523553 NA non-coding upstream 41594 55510965 ~ 55511275 (+)
G523719 NA non-coding downstream 6059 55559169 ~ 55559485 (+)
G523721 NA non-coding downstream 9372 55562482 ~ 55562802 (+)
G523746 NA non-coding downstream 36230 55589340 ~ 55636958 (+)
G523763 NA non-coding downstream 65274 55618384 ~ 55620951 (+)
G523529 NA other upstream 68262 55484249 ~ 55484607 (+)
G521914 NA other upstream 1282610 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1597739 53925942 ~ 53955130 (+)
G519603 NA other upstream 2897572 52651940 ~ 52655297 (+)
LOC110526175 LOC106587084 other downstream 557169 56020625 ~ 56120747 (+)
G525645 NA other downstream 2022974 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 2050998 57604108 ~ 57606367 (+)

Expression


Co-expression Network