G523785


Basic Information

Item Value
gene id G523785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55662941 ~ 55663185 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593687
gtatccacagaaaaacgagtcctatatcaacataacctgagaggccgctaagtaaggaagaagccactgttccaaaaccggcataaaaaaagctagactatggtttgcaactgcacatggggacaaactcttatttttgtgagaaatgtcctctggtctgatgaaacaaaaataaaactgtttggccataatgaccatcgttatgtttggaggaaaaagggggagacttgcaaggcgaagaacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU593687 True 245 lncRNA 0.42 1 55662941 55663185

Neighbor

gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 94774 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 214805 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 298199 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 527319 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 594698 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 240879 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 302037 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 308255 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 319085 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 357440 56020625 ~ 56120747 (+)
G523746 NA non-coding upstream 25983 55589340 ~ 55636958 (+)
G523763 NA non-coding upstream 41990 55618384 ~ 55620951 (+)
G523721 NA non-coding upstream 100139 55562482 ~ 55562802 (+)
G523719 NA non-coding upstream 103456 55559169 ~ 55559485 (+)
G523786 NA non-coding downstream 2625 55665810 ~ 55666017 (+)
G523792 NA non-coding downstream 16989 55680174 ~ 55680379 (+)
G523793 NA non-coding downstream 18075 55681260 ~ 55681557 (+)
G523795 NA non-coding downstream 23584 55686769 ~ 55687061 (+)
G523798 NA non-coding downstream 36159 55699344 ~ 55699597 (+)
G523529 NA other upstream 178334 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 722068 54793125 ~ 54954478 (+)
G521914 NA other upstream 1392682 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1707811 53925942 ~ 53955130 (+)
G525645 NA other downstream 1912899 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1940923 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1958663 57621795 ~ 57635241 (+)

Expression


Co-expression Network