XLOC_024388 (CR385026.1)


Basic Information

Item Value
gene id XLOC_024388
gene name CR385026.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 2012677 ~ 2013391 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00048220
ctgatgtcctgacattttatcctacccctCAGATTATACTGccaacactgcatttaaatggTTCTGAGGTTTGGGTTAGGGATAAAGTCGTTacaatattacagcttcatatcacattAATCCACATTAAAATTAACACTGGTAGCCGAATCTGATGGGTAGCATGTTGCGTCATCGAAATGTGCTACCTGCTTTTTGAATAagaggtaggacaatctgacaaggtaggacaaattGACAGAAcaccag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096868

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00048220 True 249 lncRNA 0.40 2 2012677 2013391

Neighbor

gene id symbol gene type direction distance location
XLOC_024386 CR385026.2 coding downstream 38387 1973524 ~ 1974290 (-)
XLOC_024385 NA coding downstream 61233 1946368 ~ 1951444 (-)
XLOC_024384 SLC6A13 coding downstream 291941 1695547 ~ 1720736 (-)
XLOC_024383 mon2 coding downstream 325196 1631828 ~ 1687481 (-)
XLOC_024382 dre-let-7i coding downstream 382928 1629655 ~ 1629749 (-)
XLOC_024389 NA coding upstream 113425 2126816 ~ 2165034 (-)
XLOC_024390 NA coding upstream 262134 2275525 ~ 2299749 (-)
XLOC_024391 NA coding upstream 296023 2309414 ~ 2313033 (-)
XLOC_024392 mrps35 coding upstream 319867 2333258 ~ 2355107 (-)
XLOC_024393 NA coding upstream 469721 2483112 ~ 2485048 (-)
XLOC_024381 NA non-coding downstream 386759 1624880 ~ 1625918 (-)
XLOC_024380 CR354429.1 non-coding downstream 541492 1464379 ~ 1471185 (-)
XLOC_024394 BX957346.1 non-coding upstream 532952 2546343 ~ 2638817 (-)

Expression


Co-expression Network