G523802 (LOC106587075)


Basic Information

Item Value
gene id G523802
gene name LOC106587075
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 55702806 ~ 55703719 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU593704
GGTTTTGGGGGCTCCCCAGACTCCCTGGTTGTGTCCCGAGCCCCCCTGGGGGCCCACTGTGGGAATGTGTCTGTAGGAGGGCTTGAGGGGCATGGGCAGAGGTAGGGGCAGGGTGAGGGGGCGCGAGGGCACCTGTGGAATGGGCAGAGCGCTGTGCACCGGCTTGGGTTTGGGCAGTCCCGACTTCATCTTAGAGGCCAGCAGAATGGCGGGCATCTTCCTCTGGGGTACCGAATagtttcagacacacacacacacacacacacacacacacacacacacacacacacacacacacagtactgtccGACCACACTCAAGCAGTTAAGCCGACGCTGTCCTCCCAGTAAACAAACAGTCTTACCAGCTGGAATACGAGAGTGGGATAATAAGACACAGTCAATGTGTTGGGAAGTGTACGTGTGGTCTTCCTGAATCCTGACGCTCCAATCTTTAAGAGGAGGGATCTGAATCTCGATCCGACAGTGGGAGCATTAGTCcaggtccagctctctccctAAGATCCCACCTGTTCCCTGGCTGCAATCCCTGCTCCGGTCTATTAGGAATACCGGTATTCCCAGTTTTTTACCGGTATTCCCAGTCTCTTACCGGTATTCCCAGTCTCTTACCGGGAATTCCCTGTACTCTGATGCAGGAGTTGGCAGTGTTCCATTTGCCCAGATGCAGTGAGTATTCGTCGAGGGAGTCTCTTCCTGGTGAGCTGAGTTAATTATCTTCTCTGGATGAGAGATGGACAAACACCTTGCTCCCTCGAGGAAATGAGGAGGAAGAAGGGAATgaggaaaatgaggaaaaaaCGAGAGAACAGCAACAGAGGACCACTCGCTTCGGCGACCGCTCTGCCTGTGACTGCACTGCACTGACtgccctctctctattcctcctcctcc

Function

NR:

description
neuron navigator 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU593704 True 914 lncRNA 0.54 1 55702806 55703719

Neighbor

gene id symbol gene type direction distance location
LOC110526167 LOC106587078 coding upstream 134639 55563439 ~ 55568167 (+)
LOC110526163 LOC106587071 coding upstream 254670 55375096 ~ 55448136 (+)
LOC110526930 LOC106561912 coding upstream 338064 55351729 ~ 55364742 (+)
LOC110526162 NA coding upstream 567184 55127056 ~ 55135622 (+)
LOC118965082 NA coding upstream 634563 55066200 ~ 55068243 (+)
LOC110526169 LOC106587076 coding downstream 200345 55904064 ~ 55916081 (+)
LOC110526172 LOC106561172 coding downstream 261503 55965222 ~ 55968091 (+)
LOC110526171 LOC106587080 coding downstream 267721 55971440 ~ 55980904 (+)
LOC110526173 LOC106587080 coding downstream 278551 55982270 ~ 55990919 (+)
LOC110526175 LOC106587084 coding downstream 316906 56020625 ~ 56120747 (+)
G523801 NA non-coding upstream 739 55701858 ~ 55702067 (+)
G523798 NA non-coding upstream 3209 55699344 ~ 55699597 (+)
G523795 NA non-coding upstream 15745 55686769 ~ 55687061 (+)
G523793 NA non-coding upstream 21249 55681260 ~ 55681557 (+)
G523792 NA non-coding upstream 22427 55680174 ~ 55680379 (+)
G523803 NA non-coding downstream 685 55704404 ~ 55704668 (+)
G523809 NA non-coding downstream 12101 55715820 ~ 55716073 (+)
G523816 NA non-coding downstream 22819 55726538 ~ 55726769 (+)
G523817 NA non-coding downstream 25012 55728731 ~ 55728948 (+)
G523822 NA non-coding downstream 33463 55737182 ~ 55737434 (+)
G523529 NA other upstream 218199 55484249 ~ 55484607 (+)
LOC110526161 LOC106587065 other upstream 761933 54793125 ~ 54954478 (+)
G521914 NA other upstream 1432547 54269925 ~ 54270259 (+)
G521552 prmt3 other upstream 1747676 53925942 ~ 53955130 (+)
G525645 NA other downstream 1872365 57576084 ~ 57581070 (+)
G525861 LOC106587122 other downstream 1900389 57604108 ~ 57606367 (+)
fbxo3 fbxo3 other downstream 1918129 57621795 ~ 57635241 (+)

Expression


Co-expression Network